RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 DMAC2Q9NW81 257 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 CNOT8Q9UFF9 292 aaKnown RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 C5orf60A6NFR6 353 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 ABCB4P21439 1286 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 RFX1P22670 979 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 TMOD1P28289 359 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 HOXA13P31271 388 aaPredicted RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 CDR1P51861 262 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 MAGOHP61326 146 aaKnown RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 DR1Q01658 176 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 TCP10Q12799 353 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 ZC2HC1CQ53FD0 456 aaPredicted RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 MAGOHBQ96A72 148 aaKnown RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 PSMD1Q99460 953 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 IDI2Q9BXS1 227 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 DDX20Q9UHI6 824 aaKnown RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 ANKRD62A6NC57 917 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 SLITRK3O94933 977 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 TNFAIP3P21580 790 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 ZNF131P52739 623 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 IFFO1Q0D2I5 559 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 DHX34Q14147 1143 aaKnown RBP21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 CBWD6Q4V339 395 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 CBWD3Q5JTY5 395 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 CBWD5Q5RIA9 395 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 DUPD1Q68J44 220 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 BTNL9Q6UXG8 535 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 OTOP1Q7RTM1 612 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 ZNF720Q7Z2F6 126 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 FIZ1Q96SL8 496 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 ERP44Q9BS26 406 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 IKZF4Q9H2S9 585 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 ACTR5Q9H9F9 607 aaPredicted RBP21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 NR2E1Q9Y466 385 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 BMP3P12645 472 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 MUTP22033 750 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 PRPF4BQ13523 1007 aaKnown RBP21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 CCDC121Q6ZUS5 278 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 HOOK3Q86VS8 718 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 TPH2Q8IWU9 490 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 TLCD1Q96CP7 247 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 MRIQ9BWK5 157 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 AGPAT3Q9NRZ7 376 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 ATP8A1Q9Y2Q0 1164 aa21.79■■□□□ 1.08
SYNGAP1-227ENST00000638142 G3V3G9 751 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 TRIM37O94972 964 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 SMTNP53814 917 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 HADHBP55084 474 aaKnown RBP21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 MYL7Q01449 175 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 PPP2R5CQ13362 524 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 KIF22Q14807 665 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 DCAF8Q5TAQ9 597 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 RHOT2Q8IXI1 618 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 RAPGEF5Q92565 580 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 ARHGEF26Q96DR7 871 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 DYDC2Q96IM9 177 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 KCND2Q9NZV8 630 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 FAM198AQ9UFP1 575 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 PSMD10O75832 226 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 CACNB3P54284 484 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 COG2Q14746 738 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 ABCB5Q2M3G0 1257 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 LRCH2Q5VUJ6 765 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 FAM178BQ8IXR5 827 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 CCDC13Q8IYE1 715 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 TRIM31Q9BZY9 425 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 ZDHHC18Q9NUE0 388 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 ODF2LQ9ULJ1 636 aa21.78■■□□□ 1.08
SYNGAP1-227ENST00000638142 NPM3O75607 178 aaKnown RBP21.77■■□□□ 1.08
SYNGAP1-227ENST00000638142 NUDT17P0C025 328 aa21.77■■□□□ 1.08
SYNGAP1-227ENST00000638142 DRG2P55039 364 aaKnown RBP21.77■■□□□ 1.08
SYNGAP1-227ENST00000638142 SH3BP5LQ7L8J4 393 aa21.77■■□□□ 1.08
SYNGAP1-227ENST00000638142 THAP2Q9H0W7 228 aa21.77■■□□□ 1.08
SYNGAP1-227ENST00000638142 DCDC2CA8MYV0 355 aa21.77■■□□□ 1.07
SYNGAP1-227ENST00000638142 CYP2J2P51589 502 aa21.77■■□□□ 1.07
SYNGAP1-227ENST00000638142 WDR18Q9BV38 432 aa21.77■■□□□ 1.07
SYNGAP1-227ENST00000638142 RASAL2Q9UJF2 1139 aa21.77■■□□□ 1.07
SYNGAP1-227ENST00000638142 USP21Q9UK80 565 aa21.77■■□□□ 1.07
SYNGAP1-227ENST00000638142 TRIM49P0CI25 452 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 TRIM49CP0CI26 452 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 HSPA6P17066 643 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 TRAF1Q13077 416 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 SLC9A9Q8IVB4 645 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 TATDN2Q93075 761 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 CENPTQ96BT3 561 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 SEC16BQ96JE7 1060 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 SYNGAP1Q96PV0 1343 aa21.76■■□□□ 1.07
SYNGAP1-227ENST00000638142 MIF4GDA9UHW6 222 aaKnown RBP21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 PRELPP51888 382 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 BFSP1Q12934 665 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 QPCTQ16769 361 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 CACNA2D3Q8IZS8 1091 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 SLC5A5Q92911 643 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 NACC1Q96RE7 527 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 PABPC3Q9H361 631 aaKnown RBP21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 ERVK-5Q9HDB9 667 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 SEPT11Q9NVA2 429 aaKnown RBP21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 PFASO15067 1338 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 GDF11O95390 407 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms