RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CCNJLQ8IV13 435 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 TTC5Q8N0Z6 440 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 GJD4Q96KN9 370 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 MAGEB18Q96M61 343 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 AK8Q96MA6 479 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 ERP44Q9BS26 406 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 TBC1D10AQ9BXI6 508 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 EPB41L1Q9H4G0 881 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 MMRN2Q9H8L6 949 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 LNPEPQ9UIQ6 1025 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 PABPC4LP0CB38 370 aaKnown RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 CDK7P50613 346 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 LRRC63Q05C16 580 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 AP1B1Q10567 949 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 DHX34Q14147 1143 aaKnown RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 RSPH1Q8WYR4 309 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 LENG1Q96BZ8 264 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 SLC7A6OSQ96CW6 309 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 AGAP3Q96P47 875 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 DENND2DQ9H6A0 471 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.94□□□□□ -0.34
CAPN3-221ENST00000638141 SUN2Q9UH99 717 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 STXBP5LQ9Y2K9 1186 aa12.94□□□□□ -0.34
CAPN3-221ENST00000638141 RASGRF2O14827 1237 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PFDN1O60925 122 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 MBD4O95243 580 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 GNA14O95837 355 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF24P17028 368 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 DNA2P51530 1060 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 CGB2Q6NT52 195 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 KLC3Q6P597 504 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 DTHD1Q6ZMT9 781 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 C17orf50Q8WW18 174 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 SCG3Q8WXD2 468 aaKnown RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 RUNDC3BQ96NL0 473 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 AP1M1Q9BXS5 423 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 DHX36Q9H2U1 1008 aaKnown RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PIH1D3Q9NQM4 214 aaKnown RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 NDUFA13Q9P0J0 144 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 TUBGCP4Q9UGJ1 667 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PARP2Q9UGN5 583 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 A0A0A6YYK5 440 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 TLR2O60603 784 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 DCTN3O75935 186 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 LYNP07948 512 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 ITGA2BP08514 1039 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PIM1P11309 404 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PCP11498 1178 aaKnown RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 ZFXP17010 805 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 MARK3P27448 753 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 SLC29A2Q14542 456 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 TMEM259Q4ZIN3 620 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 LRRC74BQ6ZQY2 392 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PPFIBP2Q8ND30 876 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 CATSPER2Q96P56 530 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PPP1R12CQ9BZL4 782 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 MYLK2Q9H1R3 596 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PRDM16Q9HAZ2 1276 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF212Q9UDV6 495 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 PAIP2BQ9ULR5 123 aaKnown RBP12.93□□□□□ -0.34
CAPN3-221ENST00000638141 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
CAPN3-221ENST00000638141 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 PASKQ96RG2 1323 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 PCCAP05165 728 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 UBA7P41226 1012 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 NPEPPSP55786 919 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SLC34A1Q06495 639 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 PDE4DQ08499 809 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 CBX3Q13185 183 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 TBC1D9BQ66K14 1250 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 ZDHHC24Q6UX98 284 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 ZC3H18Q86VM9 953 aaKnown RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 VSIG1Q86XK7 387 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SYCE1Q8N0S2 351 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 PROM2Q8N271 834 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 NME8Q8N427 588 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 ESR2Q92731 530 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SERPINB12Q96P63 405 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF184Q99676 751 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 ASCC2Q9H1I8 757 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SH3GLB2Q9NR46 395 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 INTUQ9ULD6 942 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 STARD13Q9Y3M8 1113 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 CYP1A1P04798 512 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 PTPN4P29074 926 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 MCM7P33993 719 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 GJA8P48165 433 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SF3A3Q12874 501 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms