RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 HMGN5P82970 282 aaKnown RBP19.81■□□□□ 0.76
PNKP-230ENST00000638016 RABEP1Q15276 862 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 CLLU1OSQ5K130 101 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 SPOUT1Q5T280 376 aaKnown RBP19.81■□□□□ 0.76
PNKP-230ENST00000638016 LRRC55Q6ZSA7 311 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 EP400NLQ6ZTU2 488 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 ADGRD2Q7Z7M1 963 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 SPPL3Q8TCT6 385 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 SLC7A3Q8WY07 619 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 CASD1Q96PB1 797 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 CWH43Q9H720 699 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 MINDY3Q9H8M7 445 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 COL4A3BPQ9Y5P4 624 aa19.81■□□□□ 0.76
PNKP-230ENST00000638016 H3BQ06 376 aaPredicted RBP19.8■□□□□ 0.76
PNKP-230ENST00000638016 DKC1O60832 514 aaKnown RBP eCLIP19.8■□□□□ 0.76
PNKP-230ENST00000638016 AAK1Q2M2I8 961 aa19.8■□□□□ 0.76
PNKP-230ENST00000638016 ZNF598Q86UK7 904 aaKnown RBP19.8■□□□□ 0.76
PNKP-230ENST00000638016 ZNF410Q86VK4 478 aa19.8■□□□□ 0.76
PNKP-230ENST00000638016 PIGOQ8TEQ8 1089 aa19.8■□□□□ 0.76
PNKP-230ENST00000638016 PRPF31Q8WWY3 499 aaKnown RBP19.8■□□□□ 0.76
PNKP-230ENST00000638016 LPPQ93052 612 aa19.8■□□□□ 0.76
PNKP-230ENST00000638016 PLVAPQ9BX97 442 aa19.8■□□□□ 0.76
PNKP-230ENST00000638016 FOXP1Q9H334 677 aaPredicted RBP19.8■□□□□ 0.76
PNKP-230ENST00000638016 ELAC1Q9H777 363 aaKnown RBP19.8■□□□□ 0.76
PNKP-230ENST00000638016 PIN4Q9Y237 131 aaKnown RBP19.8■□□□□ 0.76
PNKP-230ENST00000638016 MEIS3P2A8K0S8 358 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 SRGAP2CP0DJJ0 459 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 SPATA31C1P0DKV0 1188 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 RFC5P40937 340 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 LAMTOR4Q0VGL1 99 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 HYAL1Q12794 435 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 TTC38Q5R3I4 469 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 COLGALT1Q8NBJ5 622 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.79■□□□□ 0.76
PNKP-230ENST00000638016 POF1BQ8WVV4 589 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 P2RX5Q93086 422 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 TMX3Q96JJ7 454 aa19.79■□□□□ 0.76
PNKP-230ENST00000638016 A0A0U1RQF3 1178 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 TNFRSF10AO00220 468 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 LINC01565O15544 149 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 MED24O75448 989 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 SFPQP23246 707 aaKnown RBP eCLIP19.78■□□□□ 0.76
PNKP-230ENST00000638016 TECP42680 631 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 DLX2Q07687 328 aaPredicted RBP19.78■□□□□ 0.76
PNKP-230ENST00000638016 OTUD6AQ7L8S5 288 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 CATSPER4Q7RTX7 472 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 FERMT3Q86UX7 667 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 NOSTRINQ8IVI9 506 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 ZNF710Q8N1W2 664 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 HELQQ8TDG4 1101 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 ASAP3Q8TDY4 903 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 PSPC1Q8WXF1 523 aaKnown RBP19.78■□□□□ 0.76
PNKP-230ENST00000638016 MTRQ99707 1265 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 JPH2Q9BR39 696 aaPredicted RBP19.78■□□□□ 0.76
PNKP-230ENST00000638016 TMEM117Q9H0C3 514 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 LMAN2LQ9H0V9 348 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 CLDND1Q9NY35 253 aa19.78■□□□□ 0.76
PNKP-230ENST00000638016 LYPLA2O95372 231 aa19.77■□□□□ 0.76
PNKP-230ENST00000638016 OR52Z1P0C646 297 aa19.77■□□□□ 0.76
PNKP-230ENST00000638016 IL9P15248 144 aa19.77■□□□□ 0.76
PNKP-230ENST00000638016 RARRES1P49788 294 aa19.77■□□□□ 0.76
PNKP-230ENST00000638016 TOB1P50616 345 aaPredicted RBP19.77■□□□□ 0.76
PNKP-230ENST00000638016 GNL2Q13823 731 aaKnown RBP19.77■□□□□ 0.76
PNKP-230ENST00000638016 TWF2Q6IBS0 349 aaKnown RBP19.77■□□□□ 0.76
PNKP-230ENST00000638016 RNF149Q8NC42 400 aa19.77■□□□□ 0.76
PNKP-230ENST00000638016 IGFLR1Q9H665 355 aa19.77■□□□□ 0.76
PNKP-230ENST00000638016 ST18O60284 1047 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 FGF18O76093 207 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 LTBRP36941 435 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 PHKA2P46019 1235 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 COL19A1Q14993 1142 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 CLUL1Q15846 466 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 LEXMQ3ZCV2 418 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 POTEGQ6S5H5 508 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 MAEAQ7L5Y9 396 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 CATSPER3Q86XQ3 398 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 THNSL1Q8IYQ7 743 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 NEK9Q8TD19 979 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 PABPC5Q96DU9 382 aaKnown RBP19.76■□□□□ 0.75
PNKP-230ENST00000638016 TBC1D32Q96NH3 1257 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 GPRC5CQ9NQ84 441 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 PCDHB6Q9Y5E3 794 aa19.76■□□□□ 0.75
PNKP-230ENST00000638016 USO1O60763 962 aaKnown RBP19.75■□□□□ 0.75
PNKP-230ENST00000638016 TBX10O75333 385 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 CDC42EP1Q00587 391 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 NAALADL2Q58DX5 795 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 RBM23Q86U06 439 aaKnown RBP19.75■□□□□ 0.75
PNKP-230ENST00000638016 ABI1Q8IZP0 508 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 LRRC43Q8N309 656 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 C4orf32Q8N8J7 132 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 AGPAT5Q9NUQ2 364 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 FAM105AQ9NUU6 356 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 DACT1Q9NYF0 836 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 PPME1Q9Y570 386 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 PCDHB12Q9Y5F1 795 aa19.75■□□□□ 0.75
PNKP-230ENST00000638016 BDP1A6H8Y1 2624 aa19.74■□□□□ 0.75
PNKP-230ENST00000638016 U2AF2P26368 475 aaKnown RBP eCLIP19.74■□□□□ 0.75
PNKP-230ENST00000638016 HOXA11P31270 313 aaPredicted RBP19.74■□□□□ 0.75
PNKP-230ENST00000638016 ERVFC1P60507 584 aa19.74■□□□□ 0.75
PNKP-230ENST00000638016 RBM10P98175 930 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms