RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 FAM205CA6NFA0 338 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 MARCH6O60337 910 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 P4HBP07237 508 aaKnown RBP22.51■■□□□ 1.19
CLN6-222ENST00000637667 KRT2P35908 639 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 NR5A1Q13285 461 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 CLLU1OSQ5K130 101 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 ZNF598Q86UK7 904 aaKnown RBP22.51■■□□□ 1.19
CLN6-222ENST00000637667 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 RHPN2Q8IUC4 686 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 TLE6Q9H808 572 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 BRMS1Q9HCU9 246 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 CHST12Q9NRB3 414 aa22.51■■□□□ 1.19
CLN6-222ENST00000637667 EIF5BO60841 1220 aaKnown RBP22.5■■□□□ 1.19
CLN6-222ENST00000637667 EOMESO95936 686 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 ATF7P17544 494 aaPredicted RBP22.5■■□□□ 1.19
CLN6-222ENST00000637667 SFPQP23246 707 aaKnown RBP eCLIP22.5■■□□□ 1.19
CLN6-222ENST00000637667 NPEPPSP55786 919 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 EPHA7Q15375 998 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 KCNT2Q6UVM3 1135 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 NSUN7Q8NE18 718 aaKnown RBP22.5■■□□□ 1.19
CLN6-222ENST00000637667 TNFRSF25Q93038 417 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 MSLNLQ96KJ4 702 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 ZNF558Q96NG5 402 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 INO80BQ9C086 356 aaPredicted RBP22.5■■□□□ 1.19
CLN6-222ENST00000637667 C11orf16Q9NQ32 467 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 CLEC1BQ9P126 229 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 WRAP73Q9P2S5 460 aaPredicted RBP22.5■■□□□ 1.19
CLN6-222ENST00000637667 LZTS1Q9Y250 596 aa22.5■■□□□ 1.19
CLN6-222ENST00000637667 C19orf67A6NJJ6 358 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 FSCN2O14926 492 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 GPR37L1O60883 481 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 NEK4P51957 841 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 ERVFC1P60507 584 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 PLCB3Q01970 1234 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 PDE12Q6L8Q7 609 aaKnown RBP22.49■■□□□ 1.19
CLN6-222ENST00000637667 KSR1Q8IVT5 923 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 SLFN12Q8IYM2 578 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 SLC7A3Q8WY07 619 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 MRPS27Q92552 414 aaKnown RBP22.49■■□□□ 1.19
CLN6-222ENST00000637667 CEP170P1Q96L14 293 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 NLRP4Q96MN2 994 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 LXNQ9BS40 222 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 PUF60Q9UHX1 559 aaKnown RBP22.49■■□□□ 1.19
CLN6-222ENST00000637667 PPME1Q9Y570 386 aa22.49■■□□□ 1.19
CLN6-222ENST00000637667 FAM86C2PA6NEL3 165 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 BAG4O95429 457 aaKnown RBP22.48■■□□□ 1.19
CLN6-222ENST00000637667 EYA4O95677 639 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 GLP2RO95838 553 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 PPM1AP35813 382 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 NCAPH2Q6IBW4 605 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 C4orf19Q8IY42 314 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 EXOC8Q8IYI6 725 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 ZNF579Q8NAF0 562 aaKnown RBP22.48■■□□□ 1.19
CLN6-222ENST00000637667 HELQQ8TDG4 1101 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 TRAIPQ9BWF2 469 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 DHX33Q9H6R0 707 aaKnown RBP22.48■■□□□ 1.19
CLN6-222ENST00000637667 RGL1Q9NZL6 768 aa22.48■■□□□ 1.19
CLN6-222ENST00000637667 PIN4Q9Y237 131 aaKnown RBP22.48■■□□□ 1.19
CLN6-222ENST00000637667 PER2O15055 1255 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 JAK2O60674 1132 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 ALADP13716 330 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 PBX3P40426 434 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 RFC5P40937 340 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 PHKA2P46019 1235 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 POLGP54098 1239 aaPredicted RBP22.47■■□□□ 1.19
CLN6-222ENST00000637667 SPIRE1Q08AE8 756 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 COASYQ13057 564 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 DUSP6Q16828 381 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 TWF2Q6IBS0 349 aaKnown RBP22.47■■□□□ 1.19
CLN6-222ENST00000637667 CATSPER4Q7RTX7 472 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 SMRP1Q8NCR6 262 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 POP1Q99575 1024 aaKnown RBP22.47■■□□□ 1.19
CLN6-222ENST00000637667 CDCA3Q99618 268 aaPredicted RBP22.47■■□□□ 1.19
CLN6-222ENST00000637667 SPG21Q9NZD8 308 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 BARX2Q9UMQ3 279 aaPredicted RBP22.47■■□□□ 1.19
CLN6-222ENST00000637667 COL4A3BPQ9Y5P4 624 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 PLXNA4Q9HCM2 1894 aa22.47■■□□□ 1.19
CLN6-222ENST00000637667 FSD2A1L4K1 749 aa22.46■■□□□ 1.19
CLN6-222ENST00000637667 YWHABP31946 246 aaKnown RBP22.46■■□□□ 1.19
CLN6-222ENST00000637667 PLPP4Q5VZY2 271 aa22.46■■□□□ 1.19
CLN6-222ENST00000637667 PSPC1Q8WXF1 523 aaKnown RBP22.46■■□□□ 1.19
CLN6-222ENST00000637667 TMEM143Q96AN5 459 aa22.46■■□□□ 1.19
CLN6-222ENST00000637667 DYDC2Q96IM9 177 aa22.46■■□□□ 1.19
CLN6-222ENST00000637667 MRPL9Q9BYD2 267 aaKnown RBP22.46■■□□□ 1.19
CLN6-222ENST00000637667 ZSWIM4Q9H7M6 989 aa22.46■■□□□ 1.19
CLN6-222ENST00000637667 IFT122Q9HBG6 1241 aa22.46■■□□□ 1.19
CLN6-222ENST00000637667 BTBD18B2RXH4 712 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 DCXO43602 365 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 SKIP12755 728 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 FOSBP53539 338 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 CYP4A11Q02928 519 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 KRT17Q04695 432 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 CTTNQ14247 550 aaKnown RBP22.45■■□□□ 1.18
CLN6-222ENST00000637667 OTUD6AQ7L8S5 288 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 DIS3L2Q8IYB7 885 aaKnown RBP22.45■■□□□ 1.18
CLN6-222ENST00000637667 PRPF31Q8WWY3 499 aaKnown RBP22.45■■□□□ 1.18
CLN6-222ENST00000637667 FAM122AQ96E09 287 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 TCF25Q9BQ70 676 aa22.45■■□□□ 1.18
CLN6-222ENST00000637667 NGRNQ9NPE2 291 aaKnown RBP22.45■■□□□ 1.18
CLN6-222ENST00000637667 ENTPD7Q9NQZ7 604 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms