RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GABBR1Q9UBS5 961 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 CENPFP49454 3210 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
CLN6-217ENST00000636964 KCNA2P16389 499 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 SOX10P56693 466 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 PSMC5P62195 406 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 KRT76Q01546 638 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 SP2Q02086 613 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 KCNH2Q12809 1159 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 SWSAP1Q6NVH7 229 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 MMS22LQ6ZRQ5 1243 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 TADA2BQ86TJ2 420 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 GPRASP2Q96D09 838 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 WDR90Q96KV7 1748 aa12.56□□□□□ -0.4
CLN6-217ENST00000636964 A0A0G2JLL6 359 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 GLTPD2A6NH11 291 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 NDUFA10O95299 355 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 GNA14O95837 355 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 PAX3P23760 479 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 ZNF131P52739 623 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 FOXR2Q6PJQ5 311 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 PRRT2Q7Z6L0 340 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 MOV10L1Q9BXT6 1211 aaKnown RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 SPATC1LQ9H0A9 340 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 TRIM10Q9UDY6 481 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 ARMCX3Q9UH62 379 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 PCDHA10Q9Y5I2 948 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 OTOFQ9HC10 1997 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 DOCK5Q9H7D0 1870 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 KIAA1217Q5T5P2 1943 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 ZMYM2Q9UBW7 1377 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 TISP43B9A030 160 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 K7ENM7 598 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 CYP2J2P51589 502 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 JAK3P52333 1124 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 BMT2Q1RMZ1 405 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 CACNA2D4Q7Z3S7 1137 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 LSM14BQ9BX40 385 aaKnown RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 TAF1DQ9H5J8 278 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 NHEJ1Q9H9Q4 299 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 TXNRD2Q9NNW7 524 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 REXO2Q9Y3B8 237 aaKnown RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 MYPNQ86TC9 1320 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 RHOXF2BP0C7M4 288 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 MAP2K2P36507 400 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 HERVK_113P62684 666 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 SKIDA1Q1XH10 827 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 Q3C1V9 767 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 FAM102BQ5T8I3 360 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 WDR78Q5VTH9 848 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 TTC19Q6DKK2 380 aaPredicted RBP12.55□□□□□ -0.4
CLN6-217ENST00000636964 ANO5Q75V66 913 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 SYCP3Q8IZU3 236 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 CHST13Q8NET6 341 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 RHOXF2Q9BQY4 288 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 PTPRFP10586 1907 aa12.55□□□□□ -0.4
CLN6-217ENST00000636964 MYH11P35749 1972 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 ZNF862O60290 1169 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 SFNP31947 248 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 CYP27A1Q02318 531 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 XRRA1Q6P2D8 792 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 CYFIP1Q7L576 1253 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 ZC3H3Q8IXZ2 948 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 C4orf19Q8IY42 314 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 KCND2Q9NZV8 630 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 GOLGA6L9A6NEM1 432 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 PGK2P07205 417 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 ACTN1P12814 892 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 RPL13P26373 211 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 POLR2FP61218 127 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 STXBP2Q15833 593 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 ENOX2Q16206 610 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 EFCAB13Q8IY85 973 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 NOA1Q8NC60 698 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 JPH1Q9HDC5 661 aaPredicted RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 DBR1Q9UK59 544 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 EIF3DO15371 548 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLN6-217ENST00000636964 NOL4O94818 638 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 ABCD1P33897 745 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 MARSP56192 900 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 PEX3P56589 373 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 FIGNQ5HY92 759 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 ZNF569Q5MCW4 686 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 RIOX2Q8IUF8 465 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
CLN6-217ENST00000636964 PCIF1Q9H4Z3 704 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 LARSQ9P2J5 1176 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms