RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 DUSP6Q16828 381 aa14.16□□□□□ -0.14
CTSD-208ENST00000636843 HFE2Q6ZVN8 426 aa14.16□□□□□ -0.14
CTSD-208ENST00000636843 EDAQ92838 391 aa14.16□□□□□ -0.14
CTSD-208ENST00000636843 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
CTSD-208ENST00000636843 SH3GLB2Q9NR46 395 aa14.16□□□□□ -0.14
CTSD-208ENST00000636843 MYH9P35579 1960 aaKnown RBP14.16□□□□□ -0.14
CTSD-208ENST00000636843 FNDC1Q4ZHG4 1894 aaPredicted RBP14.16□□□□□ -0.14
CTSD-208ENST00000636843 PER2O15055 1255 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 MSH4O15457 936 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 ZNF862O60290 1169 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 SRGAP2BP0DMP2 458 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 XRCC6P12956 609 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTSD-208ENST00000636843 ATF7P17544 494 aaPredicted RBP14.15□□□□□ -0.14
CTSD-208ENST00000636843 SFNP31947 248 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 PPM1AP35813 382 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 JAK3P52333 1124 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 ERVFC1P60507 584 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 PRKCEQ02156 737 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 SCRN1Q12765 414 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 CBX2Q14781 532 aaPredicted RBP14.15□□□□□ -0.14
CTSD-208ENST00000636843 ZSCAN23Q3MJ62 389 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 LRRC71Q8N4P6 559 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 MRPS27Q92552 414 aaKnown RBP14.15□□□□□ -0.14
CTSD-208ENST00000636843 CHAMP1Q96JM3 812 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 PHF7Q9BWX1 381 aaPredicted RBP14.15□□□□□ -0.14
CTSD-208ENST00000636843 SLC26A6Q9BXS9 759 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
CTSD-208ENST00000636843 HCSTQ9UBK5 93 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 EDIL3O43854 480 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 GAS7O60861 476 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
CTSD-208ENST00000636843 NLRP5P59047 1200 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 CDC42EP1Q00587 391 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 KRT17Q04695 432 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 KCNT2Q6UVM3 1135 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 TMEM184AQ6ZMB5 413 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 BMP8AQ7Z5Y6 402 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 ECHDC2Q86YB7 292 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 ABI1Q8IZP0 508 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 LRRC43Q8N309 656 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 RDM1Q8NG50 284 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 FBXL18Q96ME1 805 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 ZNF558Q96NG5 402 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 TEKT3Q9BXF9 490 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 RNF19AQ9NV58 838 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 VPS54Q9P1Q0 977 aa14.15□□□□□ -0.14
CTSD-208ENST00000636843 C5orf42Q9H799 3197 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 EOMESO95936 686 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 DARSP14868 501 aaKnown RBP14.14□□□□□ -0.15
CTSD-208ENST00000636843 GPC3P51654 580 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 UBE2HP62256 183 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 LRCH2Q5VUJ6 765 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 LRRC55Q6ZSA7 311 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 ALYREFQ86V81 257 aaKnown RBP14.14□□□□□ -0.15
CTSD-208ENST00000636843 FAM184AQ8NB25 1140 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 VN1R2Q8NFZ6 395 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 SUSD6Q92537 303 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 SCLT1Q96NL6 688 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 UNC45AQ9H3U1 944 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 ENTPD7Q9NQZ7 604 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 DACT1Q9NYF0 836 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 SPG21Q9NZD8 308 aa14.14□□□□□ -0.15
CTSD-208ENST00000636843 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 A0A0U1RQF3 1178 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 CHMP2AO43633 222 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 PSMD10O75832 226 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 CCT2P78371 535 aaKnown RBP14.13□□□□□ -0.15
CTSD-208ENST00000636843 KRT85P78386 507 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 KCNC3Q14003 757 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 TARBP2Q15633 366 aaKnown RBP14.13□□□□□ -0.15
CTSD-208ENST00000636843 UGCGQ16739 394 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
CTSD-208ENST00000636843 Q4G0T1 1027 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 PLPP4Q5VZY2 271 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
CTSD-208ENST00000636843 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 GAS2L3Q86XJ1 694 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 TRIM22Q8IYM9 498 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 NSUN7Q8NE18 718 aaKnown RBP14.13□□□□□ -0.15
CTSD-208ENST00000636843 TBCKQ8TEA7 893 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 TCF25Q9BQ70 676 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 TMEM63CQ9P1W3 806 aa14.13□□□□□ -0.15
CTSD-208ENST00000636843 TECTAO75443 2155 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 CYP3A7-CYP3A51PA0A087WV96 503 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 JAK2O60674 1132 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 HOXB8P17481 243 aaPredicted RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 CYP3A7P24462 503 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 ZXDAP98168 799 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 RBM10P98175 930 aaKnown RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 NHLH1Q02575 133 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 XKR3Q5GH77 459 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 ANKRD54Q6NXT1 300 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 TMC7Q7Z402 723 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 ZNF598Q86UK7 904 aaKnown RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 FAM177A1Q8N128 213 aaPredicted RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 NLRP7Q8WX94 980 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms