RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ANKRD63C9JTQ0 380 aa20.55■□□□□ 0.88
CLN5-216ENST00000636780 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
CLN5-216ENST00000636780 HMGCS2P54868 508 aa20.55■□□□□ 0.88
CLN5-216ENST00000636780 DAAM2Q86T65 1068 aa20.55■□□□□ 0.88
CLN5-216ENST00000636780 TNS1Q9HBL0 1735 aaKnown RBP20.55■□□□□ 0.88
CLN5-216ENST00000636780 ANKRD65E5RJM6 399 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 RAD51CO43502 376 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 PRLRP16471 622 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 CAPN2P17655 700 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 FSTL1Q12841 308 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 MKRN4PQ13434 485 aaPredicted RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 RPS6KA1Q15418 735 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 XKR9Q5GH70 373 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 METTL13Q8N6R0 699 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 RPGRIP1Q96KN7 1286 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 INPP4AQ96PE3 977 aaPredicted RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 DDX47Q9H0S4 455 aaKnown RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 TAOK3Q9H2K8 898 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 DMAC2Q9NW81 257 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 CTDP1Q9Y5B0 961 aaPredicted RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 EIF3DO15371 548 aaKnown RBP eCLIP20.54■□□□□ 0.88
CLN5-216ENST00000636780 SLC16A3O15427 465 aaKnown RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 ATMINO43313 823 aaPredicted RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 P4HBP07237 508 aaKnown RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 STAT1P42224 750 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 MYL7Q01449 175 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 BFSP1Q12934 665 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 ZNF211Q13398 564 aaPredicted RBP20.54■□□□□ 0.88
CLN5-216ENST00000636780 KCTD16Q68DU8 428 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 CBWD2Q8IUF1 395 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 TPCN2Q8NHX9 752 aa20.54■□□□□ 0.88
CLN5-216ENST00000636780 SOX5P35711 763 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 QARSP47897 775 aaKnown RBP20.53■□□□□ 0.88
CLN5-216ENST00000636780 GPS2Q13227 327 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 ARHGEF16Q5VV41 709 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 CCDC43Q96MW1 224 aaKnown RBP20.53■□□□□ 0.88
CLN5-216ENST00000636780 THAP2Q9H0W7 228 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 CNOT7Q9UIV1 285 aaKnown RBP20.53■□□□□ 0.88
CLN5-216ENST00000636780 PPP1R9AQ9ULJ8 1098 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 MAP2K1Q02750 393 aaPredicted RBP20.53■□□□□ 0.88
CLN5-216ENST00000636780 C1orf220Q5T0J3 134 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 RNF207Q6ZRF8 634 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 HAUS6Q7Z4H7 955 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 LRRC57Q8N9N7 239 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 CASKIN2Q8WXE0 1202 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 EHMT1Q9H9B1 1298 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 UBIAD1Q9Y5Z9 338 aa20.53■□□□□ 0.88
CLN5-216ENST00000636780 TMEM110-MUSTN1A8MSY1 372 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 PPP1R37O75864 691 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 KIF4AO95239 1232 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 KRT14P02533 472 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 H2AFZP0C0S5 128 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 TUBB4BP68371 445 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 SETQ01105 290 aaPredicted RBP20.52■□□□□ 0.88
CLN5-216ENST00000636780 PRPF4BQ13523 1007 aaKnown RBP20.52■□□□□ 0.88
CLN5-216ENST00000636780 H2AFVQ71UI9 128 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 PHLDB2Q86SQ0 1253 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 SLC35G2Q8TBE7 412 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 BSNDQ8WZ55 320 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 ARL8AQ96BM9 186 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 RIT2Q99578 217 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 BUB1BO60566 1050 aaPredicted RBP20.52■□□□□ 0.88
CLN5-216ENST00000636780 ADRB2P07550 413 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 LMBRD2Q68DH5 695 aaPredicted RBP20.52■□□□□ 0.88
CLN5-216ENST00000636780 SH2D3CQ8N5H7 860 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 LMO3Q8TAP4 145 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 PDCD2LQ9BRP1 358 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 CELF4Q9BZC1 486 aaKnown RBP20.52■□□□□ 0.88
CLN5-216ENST00000636780 MYH11P35749 1972 aa20.52■□□□□ 0.88
CLN5-216ENST00000636780 SLC26A4O43511 780 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 GUCY2CP25092 1073 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 EPC2Q52LR7 807 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 DALRD3Q5D0E6 543 aaKnown RBP20.51■□□□□ 0.87
CLN5-216ENST00000636780 ANO5Q75V66 913 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 PEX26Q7Z412 305 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 WRNIP1Q96S55 665 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 COG5Q9UP83 839 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 GOLGA6BA6NDN3 693 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 PPP1R12BO60237 982 aaPredicted RBP20.51■□□□□ 0.87
CLN5-216ENST00000636780 ADSSP30520 456 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 MAP9Q49MG5 647 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 STRA6Q9BX79 667 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 TRIM31Q9BZY9 425 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 LUC7LQ9NQ29 371 aaKnown RBP20.51■□□□□ 0.87
CLN5-216ENST00000636780 HSPBP1Q9NZL4 362 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 RPTORQ8N122 1335 aa20.51■□□□□ 0.87
CLN5-216ENST00000636780 COL2A1P02458 1487 aaPredicted RBP20.51■□□□□ 0.87
CLN5-216ENST00000636780 VWA5AO00534 786 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 WDR46O15213 610 aaKnown RBP20.5■□□□□ 0.87
CLN5-216ENST00000636780 CCDC70Q6NSX1 233 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 USP38Q8NB14 1042 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 TAF4BQ92750 862 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 BTBD6Q96KE9 485 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 RNF146Q9NTX7 359 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 TMOD4Q9NZQ9 345 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 LARSQ9P2J5 1176 aaKnown RBP20.5■□□□□ 0.87
CLN5-216ENST00000636780 APEX2Q9UBZ4 518 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 TCEAL9Q9UHQ7 104 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 ODF2LQ9ULJ1 636 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms