RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LILRB3O75022 631 aa20.64■□□□□ 0.89
CLN6-212ENST00000636020 CLCN3P51790 818 aa20.64■□□□□ 0.89
CLN6-212ENST00000636020 DCLRE1AQ6PJP8 1040 aa20.64■□□□□ 0.89
CLN6-212ENST00000636020 STAMQ92783 540 aa20.64■□□□□ 0.89
CLN6-212ENST00000636020 RHOBTB2Q9BYZ6 727 aa20.64■□□□□ 0.89
CLN6-212ENST00000636020 FOXQ1Q9C009 403 aa20.64■□□□□ 0.89
CLN6-212ENST00000636020 NRDE2Q9H7Z3 1164 aa20.64■□□□□ 0.89
CLN6-212ENST00000636020 LRRN2O75325 713 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 TGM1P22735 817 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 SART3Q15020 963 aaKnown RBP20.63■□□□□ 0.89
CLN6-212ENST00000636020 CEP55Q53EZ4 464 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 SWSAP1Q6NVH7 229 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 CYP26C1Q6V0L0 522 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 SRBD1Q8N5C6 995 aaKnown RBP20.63■□□□□ 0.89
CLN6-212ENST00000636020 CTCFLQ8NI51 663 aaPredicted RBP20.63■□□□□ 0.89
CLN6-212ENST00000636020 RSPH1Q8WYR4 309 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 LZTS2Q9BRK4 669 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 SLC2A4RGQ9NR83 387 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 FBXO4Q9UKT5 387 aa20.63■□□□□ 0.89
CLN6-212ENST00000636020 CLUHO75153 1309 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 CCDC195A0A1B0GUA6 201 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 DDX39AO00148 427 aaKnown RBP20.62■□□□□ 0.89
CLN6-212ENST00000636020 HIP1O00291 1037 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 MEIS1O00470 390 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 KIF5BP33176 963 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 STARD6P59095 220 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 ZNF710Q8N1W2 664 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 LINC01465Q8N7H1 131 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 IGDCC4Q8TDY8 1250 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 BBXQ8WY36 941 aaPredicted RBP20.62■□□□□ 0.89
CLN6-212ENST00000636020 LNPKQ9C0E8 428 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 TBC1D13Q9NVG8 400 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 AKT3Q9Y243 479 aa20.62■□□□□ 0.89
CLN6-212ENST00000636020 PLEKHA8P1O95397 391 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 FGFR4P22455 802 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 MIS18BP1Q6P0N0 1132 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 CKAP2LQ8IYA6 745 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 SECISBP2LQ93073 1101 aaKnown RBP20.61■□□□□ 0.89
CLN6-212ENST00000636020 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 ZNF668Q96K58 619 aaPredicted RBP20.61■□□□□ 0.89
CLN6-212ENST00000636020 MAP7D2Q96T17 732 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 MYL10Q9BUA6 226 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 IL25Q9H293 177 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 MAN1C1Q9NR34 630 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 PCDHGA2Q9Y5H1 932 aa20.61■□□□□ 0.89
CLN6-212ENST00000636020 MAFBQ9Y5Q3 323 aaPredicted RBP20.61■□□□□ 0.89
CLN6-212ENST00000636020 ANHXE9PGG2 379 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 MAGEB2O15479 319 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 LAMTOR5O43504 91 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 DDAH1O94760 285 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 CYP21A2P08686 494 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 DARSP14868 501 aaKnown RBP20.6■□□□□ 0.89
CLN6-212ENST00000636020 SLC11A1P49279 550 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 EFCAB12Q6NXP0 572 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 ZNF654Q8IZM8 581 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 ZBTB44Q8NCP5 570 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 ATRIPQ8WXE1 791 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 SPATA6Q9NWH7 488 aaPredicted RBP20.6■□□□□ 0.89
CLN6-212ENST00000636020 DNAJB4Q9UDY4 337 aa20.6■□□□□ 0.89
CLN6-212ENST00000636020 SMG5Q9UPR3 1016 aaKnown RBP20.6■□□□□ 0.89
CLN6-212ENST00000636020 INPPL1O15357 1258 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 DHX15O43143 795 aaKnown RBP20.59■□□□□ 0.89
CLN6-212ENST00000636020 SSBP05455 408 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLN6-212ENST00000636020 LAMP2P13473 410 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 PHKA2P46019 1235 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 GNAQP50148 359 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 ANTXR2P58335 489 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 HTR4Q13639 388 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 NOMO2Q5JPE7 1267 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 TRMT1LQ7Z2T5 733 aaKnown RBP20.59■□□□□ 0.89
CLN6-212ENST00000636020 CMTR1Q8N1G2 835 aaKnown RBP20.59■□□□□ 0.89
CLN6-212ENST00000636020 LRRC71Q8N4P6 559 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 LPPQ93052 612 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 SHDQ96IW2 340 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 TRAIPQ9BWF2 469 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 EPC1Q9H2F5 836 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 MRPL17Q9NRX2 175 aaKnown RBP20.59■□□□□ 0.89
CLN6-212ENST00000636020 STK39Q9UEW8 545 aa20.59■□□□□ 0.89
CLN6-212ENST00000636020 hCG_1642624A0A1W2PR95 340 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 B4GALT3O60512 393 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 LILRB5O75023 590 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 PAPLNO95428 1278 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 TMOD1P28289 359 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 GPC3P51654 580 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 CSTF1Q05048 431 aaKnown RBP20.58■□□□□ 0.89
CLN6-212ENST00000636020 GLB1LQ6UWU2 654 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 RALYLQ86SE5 291 aaKnown RBP20.58■□□□□ 0.89
CLN6-212ENST00000636020 NCOA7Q8NI08 942 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 NELL1Q92832 810 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 ZNF707Q96C28 371 aaPredicted RBP20.58■□□□□ 0.89
CLN6-212ENST00000636020 PGBD1Q96JS3 809 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 BCO2Q9BYV7 579 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 OSBPL3Q9H4L5 887 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.58■□□□□ 0.894e-9■■■■■ 31.6
CLN6-212ENST00000636020 RALYQ9UKM9 306 aaKnown RBP20.58■□□□□ 0.89
CLN6-212ENST00000636020 USP18Q9UMW8 372 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 CEP131Q9UPN4 1083 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 TAF6LQ9Y6J9 622 aa20.58■□□□□ 0.89
CLN6-212ENST00000636020 U3KPZ7 1027 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 337.6 ms