RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 HMGB1P09429 215 aaKnown RBP23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 GNA11P29992 359 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 BCAR1P56945 870 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 KRT17Q04695 432 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 TBC1D8BQ0IIM8 1120 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 TARBP2Q15633 366 aaKnown RBP23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 MTERF2Q49AM1 385 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 LRCH2Q5VUJ6 765 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 MRPL43Q8N983 215 aaKnown RBP23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 KREMEN2Q8NCW0 462 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 KCNB2Q92953 911 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 CEP89Q96ST8 783 aa23.5■■□□□ 1.35
CHRNA7-204ENST00000635722 B4GALT3O60512 393 aa23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 ZC3H11AO75152 810 aaKnown RBP eCLIP23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 STBD1O95210 358 aa23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 TDP2O95551 362 aa23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 BRD1O95696 1058 aa23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 HOXB8P17481 243 aaPredicted RBP23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 AVPR2P30518 371 aa23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 RARS2Q5T160 578 aaKnown RBP23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 CASP10Q92851 521 aa23.49■■□□□ 1.35
CHRNA7-204ENST00000635722 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 ASGR2P07307 311 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 CCT2P78371 535 aaKnown RBP23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 MCTP2Q6DN12 878 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 BLOC1S2Q6QNY1 142 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 RIT2Q99578 217 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 TEKT3Q9BXF9 490 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 ZBP1Q9H171 429 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 NRBP2Q9NSY0 501 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 WDR87Q6ZQQ6 2873 aa23.48■■□□□ 1.35
CHRNA7-204ENST00000635722 A0A087WZ62 844 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 PSMD10O75832 226 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 EPCAMP16422 314 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 RPS6KB1P23443 525 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 JAK3P52333 1124 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 KSR1Q8IVT5 923 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 VPS52Q8N1B4 723 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 CCDC148Q8NFR7 591 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 BICD2Q8TD16 824 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 TBCKQ8TEA7 893 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 FDXACB1Q9BRP7 624 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 VN1R3Q9BXE9 311 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 RNF26Q9BY78 433 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 ADAM7Q9H2U9 754 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 INPP5FQ9Y2H2 1132 aa23.47■■□□□ 1.35
CHRNA7-204ENST00000635722 HSPA4P34932 840 aa23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 PHKA2P46019 1235 aa23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 AKAP17AQ02040 695 aaKnown RBP23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 TPRNQ4KMQ1 711 aa23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 PLA2G4FQ68DD2 849 aa23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 MIER3Q7Z3K6 550 aa23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 MRPL9Q9BYD2 267 aaKnown RBP23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 AGXT2Q9BYV1 514 aa23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 PIN4Q9Y237 131 aaKnown RBP23.46■■□□□ 1.35
CHRNA7-204ENST00000635722 C2orf16Q68DN1 1984 aa23.45■■□□□ 1.35
CHRNA7-204ENST00000635722 H0Y858 1186 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 CXCL14O95715 111 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 EOMESO95936 686 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 IFNAR1P17181 557 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 SFNP31947 248 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 TWF2Q6IBS0 349 aaKnown RBP23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 B3GNT9Q6UX72 402 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 TMEM169Q96HH4 297 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 RIPOR3Q96MK2 946 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 AIFM3Q96NN9 605 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 PRRX2Q99811 253 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 GCOM2Q9BZD3 368 aaPredicted RBP23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 TBC1D13Q9NVG8 400 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 DACT1Q9NYF0 836 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 DNAJB4Q9UDY4 337 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 NR2E1Q9Y466 385 aa23.45■■□□□ 1.34
CHRNA7-204ENST00000635722 SPTBN4Q9H254 2564 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 IGKV6-21A0A0C4DH24 114 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 GFRA3O60609 400 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 PDIA3P30101 505 aaKnown RBP23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 ALDH7A1P49419 539 aaKnown RBP23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 NLRP5P59047 1200 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 MTMR3Q13615 1198 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 NPY5RQ15761 445 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 CES5AQ6NT32 575 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 NIFKQ9BYG3 293 aaKnown RBP23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 GBP3Q9H0R5 595 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 NRDE2Q9H7Z3 1164 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 SORCS3Q9UPU3 1222 aa23.44■■□□□ 1.34
CHRNA7-204ENST00000635722 USP11P51784 963 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 ITIH3Q06033 890 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 CENPQQ7L2Z9 268 aaPredicted RBP23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 RHPN2Q8IUC4 686 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 TMEM105Q8N8V8 129 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 ETNPPLQ8TBG4 499 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 ATOH1Q92858 354 aaPredicted RBP23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 IGSF21Q96ID5 467 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 NLRP4Q96MN2 994 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 LARP6Q9BRS8 491 aaKnown RBP23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 SUCLA2Q9P2R7 463 aaPredicted RBP23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 ARID2Q68CP9 1835 aa23.43■■□□□ 1.34
CHRNA7-204ENST00000635722 SLC37A4O43826 429 aa23.42■■□□□ 1.34
CHRNA7-204ENST00000635722 SFPQP23246 707 aaKnown RBP eCLIP23.42■■□□□ 1.34
CHRNA7-204ENST00000635722 SLC11A1P49279 550 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms