RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 PCDH19Q8TAB3 1148 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 SCARB1Q8WTV0 552 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 ST8SIA2Q92186 375 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 C16orf92Q96LL3 132 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 ZNF512Q96ME7 567 aaPredicted RBP1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 EPN3Q9H201 632 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 ACBD3Q9H3P7 528 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 SMURF1Q9HCE7 757 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 ST7Q9NRC1 585 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 SAE1Q9UBE0 346 aaPredicted RBP1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 VWA7Q9Y334 891 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 PCDHA8Q9Y5H6 950 aa1.74□□□□□ -2.13
SMARCB1-209ENST00000635578 CCDC66A2RUB6 948 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 DNAJC9-AS1A6NH13 148 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 ZNF561-AS1K7EIQ3 104 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 TRIM24O15164 1050 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 ZNF185O15231 689 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 FOXP2O15409 715 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 NCR1O76036 304 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 NDUFA10O95299 355 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 FGFR1P11362 822 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 TCF3P15923 654 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 TYRP1P17643 537 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 ETFBP38117 255 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 NPEPPSP55786 919 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 ANTXR2P58335 489 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 KRTAP10-6P60371 365 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 ADAM8P78325 824 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 HDLBPQ00341 1268 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 GUCY1A3Q02108 690 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 TMEM132BQ14DG7 1078 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 PRR16Q569H4 304 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 CCDC62Q6P9F0 684 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 HTR3DQ70Z44 454 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 MAMDC2Q7Z304 686 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 SIMC1Q8NDZ2 872 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 OR5AN1Q8NGI8 311 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 CALML6Q8TD86 181 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 NELL1Q92832 810 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 LPPQ93052 612 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 GFM2Q969S9 779 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 LRFN3Q9BTN0 628 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 BRIP1Q9BX63 1249 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 KCNH6Q9H252 994 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 EPC1Q9H2F5 836 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 KIAA1586Q9HCI6 787 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 TRPM5Q9NZQ8 1165 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 KIAA1522Q9P206 1035 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 PRKAG3Q9UGI9 489 aa1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 R3HCC1Q9Y3T6 440 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 EPN1Q9Y6I3 576 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-209ENST00000635578 TRAV20A0A0B4J274 112 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 UNC119BA6NIH7 251 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 AHRRA9YTQ3 701 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 CLASP2O75122 1294 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 RASGRP1O95267 797 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 VSIG10L2P0DP72 767 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 HNRNPLP14866 589 aaKnown RBP eCLIP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 POU3F3P20264 500 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 APOBEC3AP31941 199 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 AVPR1BP47901 424 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 ZNF81P51508 661 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 SEC24CP53992 1094 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 ELLP55199 621 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 TAP1Q03518 808 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 FOXI1Q12951 378 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 GAGE13Q4V321 117 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 FAM47CQ5HY64 1035 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 NAIF1Q69YI7 327 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 DPH6Q7L8W6 267 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 NPM2Q86SE8 214 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 CLEC14AQ86T13 490 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 ARHGEF25Q86VW2 580 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 SLC44A3Q8N4M1 653 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 C9orf106Q8NAJ2 232 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 ZNF384Q8TF68 577 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 MYEOVQ96EZ4 313 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 WDR92Q96MX6 357 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 CPPED1Q9BRF8 314 aaPredicted RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 SLC46A2Q9BY10 475 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 CPEB1Q9BZB8 566 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 TGIF2Q9GZN2 237 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 AKIP1Q9NQ31 210 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 KCNH7Q9NS40 1196 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 SYBUQ9NX95 663 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 DNAI1Q9UI46 699 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 PCDHA9Q9Y5H5 950 aa1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 THOC2Q8NI27 1593 aaKnown RBP1.72□□□□□ -2.13
SMARCB1-209ENST00000635578 CHD1O14646 1710 aa1.71□□□□□ -2.13
SMARCB1-209ENST00000635578 IQCA1LA6NCM1 817 aa1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 GOLGA6L22H0YM25 854 aa1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 RNASET2O00584 256 aaKnown RBP1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 AQP7O14520 342 aa1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 WNT9AO14904 365 aa1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 GSTA4O15217 222 aa1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 JUNP05412 331 aaKnown RBP1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 HKR1P10072 659 aa1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 ATF4P18848 351 aaPredicted RBP1.71□□□□□ -2.14
SMARCB1-209ENST00000635578 VAMP1P23763 118 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms