RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ARID2Q68CP9 1835 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 SYNGAP1Q96PV0 1343 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 GSTTP1A0A1W2PQM5 241 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 GLTPD2A6NH11 291 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 POTEB2H3BUK9 544 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 K7ENM7 598 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 ATP8B1O43520 1251 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 EXOC3O60645 756 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 N4BP1O75113 896 aaKnown RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 TACC1O75410 805 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 CCDC172P0C7W6 258 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 KRT13P13646 458 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 FERP16591 822 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 ERCC3P19447 782 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 ATP4AP20648 1035 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 RFX1P22670 979 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 GTF2H1P32780 548 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 EPHX2P34913 555 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 STAT1P42224 750 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 NPTX2P47972 431 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 CYP2J2P51589 502 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 PEX3P56589 373 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 IRX3P78415 501 aaPredicted RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 SP2Q02086 613 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 CNTN2Q02246 1040 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 KLHL30Q0D2K2 578 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 BFSP1Q12934 665 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 NEDD9Q14511 834 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 ELF2Q15723 593 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 NAB2Q15742 525 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 FAM102BQ5T8I3 360 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 TCERG1LQ5VWI1 586 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 GPAT2Q6NUI2 795 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 KCNV1Q6PIU1 500 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 DLK2Q6UY11 383 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 GADL1Q6ZQY3 521 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 MAEAQ7L5Y9 396 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 MAP4K3Q8IVH8 894 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 XXYLT1Q8NBI6 393 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 LRRN4CLQ8ND94 238 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 TRIM58Q8NG06 486 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 LMO3Q8TAP4 145 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 MORC4Q8TE76 937 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 GOLGA1Q92805 767 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 SECISBP2LQ93073 1101 aaKnown RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 RPGRIP1Q96KN7 1286 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 CEP170P1Q96L14 293 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 MFSD14AQ96MC6 490 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 FBXL18Q96ME1 805 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 CCDC43Q96MW1 224 aaKnown RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 MPHOSPH6Q99547 160 aaKnown RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 IFIH1Q9BYX4 1025 aaKnown RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 ASCC2Q9H1I8 757 aaPredicted RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 IKZF4Q9H2S9 585 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 ELP3Q9H9T3 547 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 KMT5AQ9NQR1 393 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 CYP26B1Q9NR63 512 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 NRBP2Q9NSY0 501 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 RBPJLQ9UBG7 517 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 TRIM10Q9UDY6 481 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 INTUQ9ULD6 942 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 TBX20Q9UMR3 447 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 NENFQ9UMX5 172 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 JRKLQ9Y4A0 524 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 SAR1BQ9Y6B6 198 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 DUSP10Q9Y6W6 482 aa6.07□□□□□ -1.44
NEK3-211ENST00000629912 GOLGB1Q14789 3259 aaKnown RBP6.07□□□□□ -1.44
NEK3-211ENST00000629912 IGSF9BQ9UPX0 1349 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 A0A087X0T9 212 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CTAGE15A4D2H0 777 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 TMEM150BA6NC51 233 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 ANKRD63C9JTQ0 380 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 SOCS7O14512 581 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 KIAA0391O15091 583 aaKnown RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 SLC16A4O15374 487 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 FAM228BP0C875 321 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CTAGE8P0CG41 777 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 ACTN1P12814 892 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 GARTP22102 1010 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CNGA1P29973 690 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 SOX5P35711 763 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 ARL2P36404 184 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 VAMP7P51809 220 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CHMP4BP1P59074 171 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 APBA1Q02410 837 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 ITIH3Q06033 890 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 GFPT1Q06210 699 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 CETN1Q12798 172 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 FSTL1Q12841 308 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 DMP1Q13316 513 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 RAPGEF1Q13905 1077 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 BMS1Q14692 1282 aaKnown RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 TARBP2Q15633 366 aaKnown RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 EPC2Q52LR7 807 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 BRDTQ58F21 947 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 DCAF17Q5H9S7 520 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 C1orf220Q5T0J3 134 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 UTP14CQ5TAP6 766 aaKnown RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 PLA2G4FQ68DD2 849 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms