RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 POTEMA6NI47 508 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 TMPRSS15P98073 1019 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 NEK9Q8TD19 979 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 C2orf40Q9H1Z8 148 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CYP26B1Q9NR63 512 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 MAP3K20Q9NYL2 800 aaKnown RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 USP6P35125 1406 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 COPEO14579 308 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CYTH2Q99418 400 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 SYNDIG1Q9H7V2 258 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 KCNH4Q9UQ05 1017 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 NEO1Q92859 1461 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 UBA6A0AVT1 1052 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 M0QYV0 167 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 PODXLO00592 558 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 PRPF4O43172 522 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 COPS2P61201 443 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 NNTQ13423 1086 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 PALMO75781 387 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CACNB2Q08289 660 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 E2F5Q15329 346 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 EGFL8Q99944 293 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 GCOM2Q9BZD3 368 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 RNF146Q9NTX7 359 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 KIF17Q9P2E2 1029 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CAPN11Q9UMQ6 739 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 ADGRL2O95490 1459 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 GNA15P30679 374 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 VAMP7P51809 220 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 VEPH1Q14D04 833 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 XXYLT1Q8NBI6 393 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 RBM41Q96IZ5 413 aaKnown RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 EIF2AQ9BY44 585 aaKnown RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 SIK2Q9H0K1 926 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CALB1P05937 261 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 LIFRP42702 1097 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 KRT31Q15323 416 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 UNC13DQ70J99 1090 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 HIPK4Q8NE63 616 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 TDRD7Q8NHU6 1098 aaKnown RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 SCG3Q8WXD2 468 aaKnown RBP12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CPVLQ9H3G5 476 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 CLCA2Q9UQC9 943 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
SHPRH-211ENST00000629427 DFFAO00273 331 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 ADORA2BP29275 332 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 TAF11Q15544 211 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 SMYD3Q9H7B4 428 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 POLD4Q9HCU8 107 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 ANGPTL2Q9UKU9 493 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 TTC7AQ9ULT0 858 aaPredicted RBP12.52□□□□□ -0.4
SHPRH-211ENST00000629427 GRIK1P39086 918 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 ARL4CP56559 192 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.4
SHPRH-211ENST00000629427 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 RCSD1Q6JBY9 416 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 ACAD11Q709F0 780 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 DDX53Q86TM3 631 aaKnown RBP12.52□□□□□ -0.4
SHPRH-211ENST00000629427 KIF12Q96FN5 646 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 PANX2Q96RD6 677 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 PCSK1NQ9UHG2 260 aa12.52□□□□□ -0.4
SHPRH-211ENST00000629427 RPS6KA4O75676 772 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 NR3C1P04150 777 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 PRDX5P30044 214 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 GPC5P78333 572 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 KRT39Q6A163 491 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 VPS11Q9H270 941 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 SYNGAP1Q96PV0 1343 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 MOCS2O96007 188 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-211ENST00000629427 LCP1P13796 627 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 SYCE1LA8MT33 242 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 NMT2O60551 498 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-211ENST00000629427 SPARCL1Q14515 664 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 SFR1Q86XK3 245 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
SHPRH-211ENST00000629427 POLR3FQ9H1D9 316 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-211ENST00000629427 KRT37O76014 449 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 EIF3BP55884 814 aaKnown RBP12.52□□□□□ -0.41
SHPRH-211ENST00000629427 PRAMEP78395 509 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 NAALADL2Q58DX5 795 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 TEKT4Q8WW24 435 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 CD209Q9NNX6 404 aa12.52□□□□□ -0.41
SHPRH-211ENST00000629427 NFU1Q9UMS0 254 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms