RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 DSC3Q14574 896 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 GSE1Q14687 1217 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 COL19A1Q14993 1142 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 SF3A1Q15459 793 aaKnown RBP10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 CTC1Q2NKJ3 1217 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 LRCH2Q5VUJ6 765 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 GALNT17Q6IS24 598 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 RBM23Q86U06 439 aaKnown RBP10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 FAM177A1Q8N128 213 aaPredicted RBP10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 GJD3Q8N144 294 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 LINC01465Q8N7H1 131 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 LINC00301Q8NCQ3 95 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 KCNG4Q8TDN1 519 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 POF1BQ8WVV4 589 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 TNFRSF25Q93038 417 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 LRFN3Q9BTN0 628 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 TEKT3Q9BXF9 490 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 C11orf16Q9NQ32 467 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 NRBP2Q9NSY0 501 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 TYW1Q9NV66 732 aaKnown RBP10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 AKT3Q9Y243 479 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 RWDD3Q9Y3V2 267 aa10.15□□□□□ -0.78
SPTAN1-219ENST00000629378 CYP3A7-CYP3A51PA0A087WV96 503 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 EML1O00423 815 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 SPTLC2O15270 562 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 TBX10O75333 385 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 CYP3A7P24462 503 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 ME1P48163 572 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 TOB1P50616 345 aaPredicted RBP10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 FAM189BP81408 668 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 RBM10P98175 930 aaKnown RBP10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 ADAM15Q13444 863 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 SLC39A14Q15043 492 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 INF2Q27J81 1249 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 MTERF2Q49AM1 385 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 Q4G0T1 1027 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 RILPL1Q5EBL4 403 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 SPOUT1Q5T280 376 aaKnown RBP10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 LRRC55Q6ZSA7 311 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 SLC24A5Q71RS6 500 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 MIER3Q7Z3K6 550 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 DAGLBQ8NCG7 672 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 P2RX5Q93086 422 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 SYAP1Q96A49 352 aaPredicted RBP10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 CEP89Q96ST8 783 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 RIT2Q99578 217 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 PLVAPQ9BX97 442 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 LMAN2LQ9H0V9 348 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 CWH43Q9H720 699 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 RNF19AQ9NV58 838 aa10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 NOL7Q9UMY1 257 aaKnown RBP10.14□□□□□ -0.79
SPTAN1-219ENST00000629378 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 PI4K2BG5E9Z4 385 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 PER2O15055 1255 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 MAGEB2O15479 319 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 SLC37A4O43826 429 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 ATP2B1P20020 1258 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 PBX3P40426 434 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 NRIP1P48552 1158 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 GPC3P51654 580 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 ERVFC1P60507 584 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 NONOQ15233 471 aaKnown RBP eCLIP10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 PTPAQ15257 358 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 TARBP2Q15633 366 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 LETM2Q2VYF4 491 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 EARS2Q5JPH6 523 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 B3GNT9Q6UX72 402 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 KSR1Q8IVT5 923 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 ETNPPLQ8TBG4 499 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 FAM167AQ96KS9 214 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 MBOAT7Q96N66 472 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 CASD1Q96PB1 797 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 C1QTNF1Q9BXJ1 281 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 ATP6V0A4Q9HBG4 840 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 C1orf112Q9NSG2 853 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 TMEM63CQ9P1W3 806 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 SEPT9Q9UHD8 586 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 PCDHA7Q9UN72 937 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 CEP131Q9UPN4 1083 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 MYH15Q9Y2K3 1946 aa10.13□□□□□ -0.79
SPTAN1-219ENST00000629378 MBTPS2O43462 519 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 PPP6R2O75170 966 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 LIG1P18858 919 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 EIF4BP23588 611 aaKnown RBP10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 TMOD1P28289 359 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 SFNP31947 248 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 JAK3P52333 1124 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 ZP2Q05996 745 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 TBC1D8BQ0IIM8 1120 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 PUS10Q3MIT2 529 aaKnown RBP10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 ZSCAN23Q3MJ62 389 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 LONRF3Q496Y0 759 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 CCDC183Q5T5S1 534 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 PLA2G4FQ68DD2 849 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 PIK3AP1Q6ZUJ8 805 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 COLGALT1Q8NBJ5 622 aa10.12□□□□□ -0.79
SPTAN1-219ENST00000629378 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms