RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 LYPLA2O95372 231 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 SRGAP2CP0DJJ0 459 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 SKIP12755 728 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 TECP42680 631 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 GATMP50440 423 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 TFF2Q03403 129 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 MCTP1Q6DN14 999 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 TWF2Q6IBS0 349 aaKnown RBP17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 ECHDC2Q86YB7 292 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 KSR1Q8IVT5 923 aa17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 ZNF579Q8NAF0 562 aaKnown RBP17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 PRPF31Q8WWY3 499 aaKnown RBP17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 NSUN3Q9H649 340 aaKnown RBP17.75■□□□□ 0.43
CHRNA4-211ENST00000628606 FNDC1Q4ZHG4 1894 aaPredicted RBP17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 A0A0U1RQF3 1178 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 H3BQV1 296 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 ZBTB39O15060 712 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 DGAT1O75907 488 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 EOMESO95936 686 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 LINC00271P0C7V0 271 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 U2AF2P26368 475 aaKnown RBP eCLIP17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 LAMTOR4Q0VGL1 99 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 MXD4Q14582 209 aaPredicted RBP17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 SRGAP1Q7Z6B7 1085 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 PPP2R3CQ969Q6 453 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 TUFT1Q9NNX1 390 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 ALG13Q9NP73 1137 aaKnown RBP17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 PIN4Q9Y237 131 aaKnown RBP17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 MYO7AQ13402 2215 aa17.74■□□□□ 0.43
CHRNA4-211ENST00000628606 GRM6O15303 877 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 FGFR1P11362 822 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 TFDP1Q14186 410 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 CSPP1Q1MSJ5 1256 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 EP400NLQ6ZTU2 488 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 KLHL23Q8NBE8 558 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 TYW1Q9NV66 732 aaKnown RBP17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 PLAGL2Q9UPG8 496 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
CHRNA4-211ENST00000628606 BRWD1Q9NSI6 2320 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 NCK2O43639 380 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 CSPG5O95196 566 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 LAG3P18627 525 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 GJB2P29033 226 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 PHKA2P46019 1235 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 TCEAL5Q5H9L2 206 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 HAUS3Q68CZ6 603 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 THNSL1Q8IYQ7 743 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 RNF149Q8NC42 400 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 ADAMTS19Q8TE59 1207 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 PIGOQ8TEQ8 1089 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 NACC1Q96RE7 527 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 POLR3CQ9BUI4 534 aaPredicted RBP17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 UBE2ZQ9H832 354 aaPredicted RBP17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 IFT122Q9HBG6 1241 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 STK24Q9Y6E0 443 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 ARID2Q68CP9 1835 aa17.72■□□□□ 0.43
CHRNA4-211ENST00000628606 TTC28Q96AY4 2481 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 ERLIN2O94905 339 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 ITGB1P05556 798 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 RARRES1P49788 294 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 RAB27AP51159 221 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 CATSPER3Q86XQ3 398 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 LRRC43Q8N309 656 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 VCANP13611 3396 aa17.71■□□□□ 0.43
CHRNA4-211ENST00000628606 KIAA1671Q9BY89 1806 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 USO1O60763 962 aaKnown RBP17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 CD2BP2O95400 341 aaKnown RBP17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 RPA1P27694 616 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 KCNQ1P51787 676 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 PTGDRQ13258 359 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 PCBP1Q15365 356 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 SPPL3Q8TCT6 385 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 MICAL1Q8TDZ2 1067 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 POF1BQ8WVV4 589 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 RSPH1Q8WYR4 309 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 PGBD4Q96DM1 585 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 CASD1Q96PB1 797 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 UHRF1Q96T88 793 aaPredicted RBP17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 TRAIPQ9BWF2 469 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 MRPL9Q9BYD2 267 aaKnown RBP17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 LRWD1Q9UFC0 647 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 NCOR1O75376 2440 aa17.7■□□□□ 0.42
CHRNA4-211ENST00000628606 A0A087WWV3 80 aa17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 LAD1O00515 517 aa17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 MED24O75448 989 aa17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 SPATA31C1P0DKV0 1188 aa17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 BMP1P13497 986 aa17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 MUTP22033 750 aa17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 KCNA5P22460 613 aa17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 CCT6AP40227 531 aaKnown RBP17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 FXR2P51116 673 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHRNA4-211ENST00000628606 UBE3AQ05086 875 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms