RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 DACT1Q9NYF0 836 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 RGL1Q9NZL6 768 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 HCSTQ9UBK5 93 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
UBR1-212ENST00000627960 FGF18O76093 207 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 LAG3P18627 525 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBR1-212ENST00000627960 YWHABP31946 246 aaKnown RBP13.55□□□□□ -0.24
UBR1-212ENST00000627960 RFC5P40937 340 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 FOSBP53539 338 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 DLX2Q07687 328 aaPredicted RBP13.55□□□□□ -0.24
UBR1-212ENST00000627960 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 ZNF598Q86UK7 904 aaKnown RBP13.55□□□□□ -0.24
UBR1-212ENST00000627960 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 SLC7A3Q8WY07 619 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 LXNQ9BS40 222 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 DHX33Q9H6R0 707 aaKnown RBP13.55□□□□□ -0.24
UBR1-212ENST00000627960 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 PCDHA12Q9UN75 941 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 FAM50BQ9Y247 325 aa13.55□□□□□ -0.24
UBR1-212ENST00000627960 LINC01565O15544 149 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 SLITRK3O94933 977 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 POLGP54098 1239 aaPredicted RBP13.54□□□□□ -0.24
UBR1-212ENST00000627960 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
UBR1-212ENST00000627960 CALCRLQ16602 461 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 CLLU1OSQ5K130 101 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 ABI1Q8IZP0 508 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 GJD3Q8N144 294 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 LRRC43Q8N309 656 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 EFHBQ8N7U6 833 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
UBR1-212ENST00000627960 KHSRPQ92945 711 aaKnown RBP eCLIP13.54□□□□□ -0.24
UBR1-212ENST00000627960 NLRP4Q96MN2 994 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 IFT122Q9HBG6 1241 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 PCDHGC5Q9Y5F6 944 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 COL4A3BPQ9Y5P4 624 aa13.54□□□□□ -0.24
UBR1-212ENST00000627960 WNT7AO00755 349 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 ZBTB39O15060 712 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 TBX10O75333 385 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 SKIP12755 728 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 ATF7P17544 494 aaPredicted RBP13.53□□□□□ -0.24
UBR1-212ENST00000627960 TXKP42681 527 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 PHKA2P46019 1235 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 NRIP1P48552 1158 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 ERVFC1P60507 584 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 CLUL1Q15846 466 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 XKR9Q5GH70 373 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 KCNT2Q6UVM3 1135 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 CATSPER4Q7RTX7 472 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 RBM23Q86U06 439 aaKnown RBP13.53□□□□□ -0.24
UBR1-212ENST00000627960 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 TPH2Q8IWU9 490 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 HELQQ8TDG4 1101 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 MICAL1Q8TDZ2 1067 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 PSPC1Q8WXF1 523 aaKnown RBP13.53□□□□□ -0.24
UBR1-212ENST00000627960 TMEM143Q96AN5 459 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 ZSCAN31Q96LW9 406 aaPredicted RBP13.53□□□□□ -0.24
UBR1-212ENST00000627960 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 HSD17B14Q9BPX1 270 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
UBR1-212ENST00000627960 LLPHQ9BRT6 129 aaKnown RBP13.53□□□□□ -0.24
UBR1-212ENST00000627960 C1QTNF1Q9BXJ1 281 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 TTC12Q9H892 705 aaPredicted RBP13.53□□□□□ -0.24
UBR1-212ENST00000627960 TLR9Q9NR96 1032 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 PRKAG3Q9UGI9 489 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 LZTS1Q9Y250 596 aa13.53□□□□□ -0.24
UBR1-212ENST00000627960 FSCN2O14926 492 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 ASAP2O43150 1006 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 MBTPS2O43462 519 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 GAS2O43903 313 aaKnown RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 NEMFO60524 1076 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 LYPLA2O95372 231 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 SRGAP2CP0DJJ0 459 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 GUCY1B3Q02153 619 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 LAMTOR4Q0VGL1 99 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 EMC2Q15006 297 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 SAFBQ15424 915 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBR1-212ENST00000627960 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 PDE12Q6L8Q7 609 aaKnown RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 SRGAP1Q7Z6B7 1085 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 TCP11Q8WWU5 503 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 MSLNLQ96KJ4 702 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 ZNF558Q96NG5 402 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 KIF2CQ99661 725 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 TLE6Q9H808 572 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 ANKEF1Q9NU02 776 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 CLEC1BQ9P126 229 aa13.52□□□□□ -0.25
UBR1-212ENST00000627960 PUF60Q9UHX1 559 aaKnown RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 CD207Q9UJ71 328 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms