RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TAC1P20366 129 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 TSPYL2Q9H2G4 693 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-209ENST00000627620 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 TSPY1Q01534 308 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 TTC17Q96AE7 1141 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 BPIFA3Q9BQP9 254 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 PP2D1A8MPX8 630 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 LXNQ9BS40 222 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 M0QYV0 167 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 NFKBIAP25963 317 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 ELMSAN1Q6PJG2 1045 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 CRLF3Q8IUI8 442 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 PRPF38AQ8NAV1 312 aaKnown RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 DRC3Q9H069 523 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 C2orf40Q9H1Z8 148 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 TBXAS1P24557 533 aaPredicted RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 PSMC5P62195 406 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 SERPINI1Q99574 410 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 NUP85Q9BW27 656 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 THEGQ9P2T0 379 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 MAPK13O15264 365 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 TDP2O95551 362 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 PAPOLAP51003 745 aaKnown RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 TMPRSS15P98073 1019 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
SCN8A-209ENST00000627620 CCDC138Q96M89 665 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 FSD1LQ9BXM9 530 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 KRT82Q9NSB4 513 aa13.68□□□□□ -0.22
SCN8A-209ENST00000627620 SDC4P31431 198 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 SEL1LQ9UBV2 794 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 TRPA1O75762 1119 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 SPARCL1Q14515 664 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 KRT33BQ14525 404 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 DRAP1Q14919 205 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-209ENST00000627620 APOBEC3FQ8IUX4 373 aaKnown RBP13.67□□□□□ -0.22
SCN8A-209ENST00000627620 FBXL13Q8NEE6 735 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 SAAL1Q96ER3 474 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 ZNF668Q96K58 619 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-209ENST00000627620 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-209ENST00000627620 PITPNM3Q9BZ71 974 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 AFF2P51816 1311 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 ANO9A1A5B4 782 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 KRT39Q6A163 491 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 PACSIN2Q9UNF0 486 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-209ENST00000627620 CREB3O43889 395 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 KRT38O76015 456 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 GNA15P30679 374 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 CXorf38Q8TB03 319 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 TRAIPQ9BWF2 469 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 ACAD9Q9H845 621 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 ACTR5Q9H9F9 607 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-209ENST00000627620 PCSK1NQ9UHG2 260 aa13.67□□□□□ -0.22
SCN8A-209ENST00000627620 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 A0A0G2JND7 137 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 PI4K2BG5E9Z4 385 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 MMP19Q99542 508 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 INTUQ9ULD6 942 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 RASA4BC9J798 803 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 RASA4O43374 803 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 FOXO4P98177 505 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 RNF217Q8TC41 542 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 ELAC2Q9BQ52 826 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 EIF2AK1Q9BQI3 630 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 MRPL4Q9BYD3 311 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 RECQLP46063 649 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 PSMC1P62191 440 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 NSUN2Q08J23 767 aaKnown RBP eCLIP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 KIF19Q2TAC6 998 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 ZNF746Q6NUN9 644 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 HIBCHQ6NVY1 386 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 IFT43Q96FT9 208 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 SPATA33Q96N06 139 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 SUCLA2Q9P2R7 463 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 ORC4O43929 436 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 MMEP08473 750 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 AKR1B1P15121 316 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 PEX19P40855 299 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 ZNF211Q13398 564 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 NEDD1Q8NHV4 660 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 THOC1Q96FV9 657 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 TTC7AQ9ULT0 858 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 MAP3K7O43318 606 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 APOEP02649 317 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 ESRRGP62508 458 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 CDR2Q01850 454 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms