RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ENTPD5O75356 428 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 TDP2O95551 362 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 ALDH3A1P30838 453 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 KCNJ1P48048 391 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
PMS1-221ENST00000624204 TNNI2P48788 182 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 MGAT5Q09328 741 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 ECHDC2Q86YB7 292 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 CCDC105Q8IYK2 499 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 CTNNBL1Q8WYA6 563 aaPredicted RBP16.35■□□□□ 0.21
PMS1-221ENST00000624204 CEP63Q96MT8 703 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 EPAS1Q99814 870 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 LRRC42Q9Y546 428 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 FAM187AA6NFU0 413 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 PEX11AO75192 247 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 GJB6O95452 261 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 TPBGLP0DKB5 382 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 CCNG1P51959 295 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 HP1BP3Q5SSJ5 553 aaPredicted RBP16.35■□□□□ 0.21
PMS1-221ENST00000624204 SLFN11Q7Z7L1 901 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 SUPT20HQ8NEM7 779 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 TTC8Q8TAM2 541 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 UCMAQ8WVF2 138 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 ITFG2Q969R8 447 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 RAB34Q9BZG1 259 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
PMS1-221ENST00000624204 VCXQ9H320 206 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 METTL5Q9NRN9 209 aaKnown RBP16.35■□□□□ 0.21
PMS1-221ENST00000624204 GRHL1Q9NZI5 618 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 SLC37A4O43826 429 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 GM2AP17900 193 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 GNAZP19086 355 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 GCLCP48506 637 aaPredicted RBP16.34■□□□□ 0.21
PMS1-221ENST00000624204 SLC5A9Q2M3M2 681 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 PITPNM3Q9BZ71 974 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 CYP39A1Q9NYL5 469 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 RGL1Q9NZL6 768 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 SH3BP1Q9Y3L3 701 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 hCG_2014768A0A024R1R8 64 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 SP100P23497 879 aaPredicted RBP16.34■□□□□ 0.21
PMS1-221ENST00000624204 CNGA1P29973 690 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 GNA11P29992 359 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 DHX34Q14147 1143 aaKnown RBP16.34■□□□□ 0.21
PMS1-221ENST00000624204 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
PMS1-221ENST00000624204 DAGLBQ8NCG7 672 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 FAM13CQ8NE31 585 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 MYLK2Q9H1R3 596 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 IL17RBQ9NRM6 502 aa16.34■□□□□ 0.21
PMS1-221ENST00000624204 CNOT7Q9UIV1 285 aaKnown RBP16.34■□□□□ 0.21
PMS1-221ENST00000624204 EPHB2P29323 1055 aa16.33■□□□□ 0.21
PMS1-221ENST00000624204 KCNQ4P56696 695 aa16.33■□□□□ 0.21
PMS1-221ENST00000624204 ALG3Q92685 438 aa16.33■□□□□ 0.21
PMS1-221ENST00000624204 TAOK3Q9H2K8 898 aa16.33■□□□□ 0.21
PMS1-221ENST00000624204 EMILIN3Q9NT22 766 aa16.33■□□□□ 0.21
PMS1-221ENST00000624204 AJAP1Q9UKB5 411 aaPredicted RBP16.33■□□□□ 0.21
PMS1-221ENST00000624204 PFASO15067 1338 aa16.33■□□□□ 0.21
PMS1-221ENST00000624204 CAMTA1Q9Y6Y1 1673 aa16.33■□□□□ 0.21
PMS1-221ENST00000624204 FGRP09769 529 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 PON1P27169 355 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 DRAXINQ8NBI3 349 aaPredicted RBP16.33■□□□□ 0.2
PMS1-221ENST00000624204 NPTXRO95502 500 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 USP4Q13107 963 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 CUL3Q13618 768 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 PPP2R5EQ16537 467 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 CCDC137Q6PK04 289 aaKnown RBP16.33■□□□□ 0.2
PMS1-221ENST00000624204 VSTM1Q6UX27 236 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 SRRM1Q8IYB3 904 aaKnown RBP16.33■□□□□ 0.2
PMS1-221ENST00000624204 LRRC27Q9C0I9 530 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 NKIRAS1Q9NYS0 192 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.2
PMS1-221ENST00000624204 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 SUGT1Q9Y2Z0 365 aa16.33■□□□□ 0.2
PMS1-221ENST00000624204 RNF8O76064 485 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
PMS1-221ENST00000624204 XRCC5P13010 732 aaKnown RBP16.32■□□□□ 0.2
PMS1-221ENST00000624204 MPP2Q14168 576 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 RCN2Q14257 317 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 GRM4Q14833 912 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 ECM1Q16610 540 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 ARHGAP44Q17R89 818 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
PMS1-221ENST00000624204 BTNL9Q6UXG8 535 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
PMS1-221ENST00000624204 GLI3P10071 1580 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 ANKRD63C9JTQ0 380 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 E9PMD0 336 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 CLIC2O15247 247 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 DDX3YO15523 660 aaKnown RBP16.32■□□□□ 0.2
PMS1-221ENST00000624204 CCNB1P14635 433 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 CALCOCO2Q13137 446 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 TBC1D25Q3MII6 688 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 USP17L2Q6R6M4 530 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 PHLDB2Q86SQ0 1253 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 CCDC65Q8IXS2 484 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 CKAP2Q8WWK9 683 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 FGD4Q96M96 766 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms