RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PRPF6O94906 941 aaKnown RBP19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 GNAT1P11488 350 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 TMOD1P28289 359 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 NCKAP1LP55160 1127 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 IQCB1Q15051 598 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 ZC2HC1CQ53FD0 456 aaPredicted RBP19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 DHX40Q8IX18 779 aaKnown RBP19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 NELFCDQ8IXH7 590 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 ZNF333Q96JL9 665 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 KIFC3Q9BVG8 833 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 KCNG1Q9UIX4 513 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 RWDD2AQ9UIY3 292 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 PCDHB13Q9Y5F0 798 aa19.64■□□□□ 0.73
PTCHD3-202ENST00000622555 EIF3DO15371 548 aaKnown RBP eCLIP19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 NAMPTP43490 491 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 MYL5Q02045 173 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 LAMTOR4Q0VGL1 99 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 HIC1Q14526 733 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 MXD4Q14582 209 aaPredicted RBP19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 FAM47CQ5HY64 1035 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 HAUS6Q7Z4H7 955 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 RHPN2Q8IUC4 686 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 LINC01465Q8N7H1 131 aa19.63■□□□□ 0.73
PTCHD3-202ENST00000622555 MBLAC1A4D2B0 266 aaPredicted RBP19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 LRRIQ4A6NIV6 560 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 CCNE1P24864 410 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ZNF200P98182 395 aaPredicted RBP19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ALCAMQ13740 583 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 CAPSQ13938 189 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 KSR1Q8IVT5 923 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 DEPTORQ8TB45 409 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ZNF507Q8TCN5 953 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 P2RX5Q93086 422 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ARMC5Q96C12 935 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 GLT1D1Q96MS3 346 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 MAP7D2Q96T17 732 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 NTPCRQ9BSD7 190 aaKnown RBP19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 GTF2IRD1Q9UHL9 959 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 AKT3Q9Y243 479 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 UBE4BO95155 1302 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 TRIM49BA6NDI0 452 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 SMTNL1A8MU46 457 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 GJB1P08034 283 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 CYP2C9P11712 490 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 HOXC8P31273 242 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ADAM17P78536 824 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 BMT2Q1RMZ1 405 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 TMEM161BQ8NDZ6 487 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ENOX1Q8TC92 643 aaKnown RBP19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 MED15Q96RN5 788 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 SEMA6BQ9H3T3 888 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ST6GALNAC4Q9H4F1 302 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 ADGRA3Q8IWK6 1321 aa19.62■□□□□ 0.73
PTCHD3-202ENST00000622555 BICDL2A1A5D9 508 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 H0YCG3 227 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 GOLGA6L19H0YKK7 550 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 IKBKBO14920 756 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 ASAP2O43150 1006 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 TREHO43280 583 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 PPP1R37O75864 691 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 SRGAP2CP0DJJ0 459 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 PMS1P54277 932 aaKnown RBP19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 KCNA1Q09470 495 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 KNOP1Q1ED39 458 aaKnown RBP19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 STRA6Q9BX79 667 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 FAM49AQ9H0Q0 323 aaPredicted RBP19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 OGDHLQ9ULD0 1010 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 PHF24Q9UPV7 400 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 SIP14410 1827 aa19.61■□□□□ 0.73
PTCHD3-202ENST00000622555 A0A1W2PQ45 241 aaPredicted RBP19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 A0A1W2PQY0 241 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 DENND3A2RUS2 1198 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 DNM1LO00429 736 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 GRIN2DO15399 1336 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 VTNP04004 478 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 HOXD13P35453 343 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 GTF2BQ00403 316 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 ITGA7Q13683 1181 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 TFDP1Q14186 410 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 TPD52L1Q16890 204 aaPredicted RBP19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 CENPPQ6IPU0 288 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 RUFY4Q6ZNE9 571 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 KIAA0319LQ8IZA0 1049 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 RNF149Q8NC42 400 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 NLRP4Q96MN2 994 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 PPP1R9BQ96SB3 815 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 TSG101Q99816 390 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 ARHGAP28Q9P2N2 729 aa19.6■□□□□ 0.73
PTCHD3-202ENST00000622555 SMIM35A0A1B0GVV1 85 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 NCAPHQ15003 741 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 SPATA1Q5VX52 437 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 ANKRD40Q6AI12 368 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 GDF6Q6KF10 455 aaPredicted RBP19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 SESTD1Q86VW0 696 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 SYCP3Q8IZU3 236 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 HVCN1Q96D96 273 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 ZNF668Q96K58 619 aaPredicted RBP19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 ACCSQ96QU6 501 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 PPP1R16BQ96T49 567 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 KCTD10Q9H3F6 313 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms