RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 SUCLA2Q9P2R7 463 aaPredicted RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 NAGPAQ9UK23 515 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 MPHOSPH10O00566 681 aaKnown RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 SLC16A3O15427 465 aaKnown RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 ATP4AP20648 1035 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 CYP3A7P24462 503 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 MMP13P45452 471 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 CTCFP49711 727 aaPredicted RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 GABPAQ06546 454 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 PPP2R5EQ16537 467 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 SPDYCQ5MJ68 293 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 ZNF571Q7Z3V5 609 aaPredicted RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 SLC17A8Q8NDX2 589 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 EPB41L4BQ9H329 900 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 ZFATQ9P243 1243 aa14.09□□□□□ -0.15
CHD1L-210ENST00000622533 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
CHD1L-210ENST00000622533 DPPA5A6NC42 116 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 A6NHS1 94 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 PDXKO00764 312 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 XRCC5P13010 732 aaKnown RBP14.08□□□□□ -0.15
CHD1L-210ENST00000622533 ATP2A2P16615 1042 aaKnown RBP14.08□□□□□ -0.15
CHD1L-210ENST00000622533 NFIXQ14938 502 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 KNOP1Q1ED39 458 aaKnown RBP14.08□□□□□ -0.15
CHD1L-210ENST00000622533 MFSD14BQ5SR56 506 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 DAAM2Q86T65 1068 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 RASGEF1CQ8N431 466 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 TPCN2Q8NHX9 752 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 GGA1Q9UJY5 639 aa14.08□□□□□ -0.15
CHD1L-210ENST00000622533 UTP11Q9Y3A2 253 aaKnown RBP14.08□□□□□ -0.15
CHD1L-210ENST00000622533 SPDYE3A6NKU9 549 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 UFL1O94874 794 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 SLC12A3P55017 1021 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 CLUL1Q15846 466 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 PEX26Q7Z412 305 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 SLFN11Q7Z7L1 901 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 ZCWPW1Q9H0M4 648 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 DHX36Q9H2U1 1008 aaKnown RBP14.08□□□□□ -0.16
CHD1L-210ENST00000622533 MLXIPLQ9NP71 852 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 FAM114A2Q9NRY5 505 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 IRAK4Q9NWZ3 460 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 FOCADQ5VW36 1801 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 POTEB3A0JP26 581 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 GTPBP10A4D1E9 387 aaKnown RBP14.08□□□□□ -0.16
CHD1L-210ENST00000622533 POTECB2RU33 542 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 RGS16O15492 202 aaPredicted RBP14.08□□□□□ -0.16
CHD1L-210ENST00000622533 H2AFZP0C0S5 128 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 TUBP50607 506 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 SLMAPQ14BN4 828 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 POTEBQ6S5H4 581 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 H2AFVQ71UI9 128 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 HOOK3Q86VS8 718 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 ATP8B4Q8TF62 1192 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
CHD1L-210ENST00000622533 MBOAT7Q96N66 472 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 FGFBP2Q9BYJ0 223 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 PIDD1Q9HB75 910 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 FGFR1OP2Q9NVK5 253 aa14.08□□□□□ -0.16
CHD1L-210ENST00000622533 SPDYE5A6NIY4 337 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 TBX3O15119 743 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 SNX3O60493 162 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 PPFIA2O75334 1257 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 PDHA1P08559 390 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 GNAT1P11488 350 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 PON1P27169 355 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 MSH2P43246 934 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 GPSM2P81274 684 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 SLC30A9Q6PML9 568 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 DPP8Q6V1X1 898 aaPredicted RBP14.07□□□□□ -0.16
CHD1L-210ENST00000622533 KCTD17Q8N5Z5 321 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
CHD1L-210ENST00000622533 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
CHD1L-210ENST00000622533 DNM3Q9UQ16 869 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 SMIM24O75264 130 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 FERP16591 822 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 RPS6KA3P51812 740 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 PLTPP55058 493 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 COPS2P61201 443 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 AP3B2Q13367 1082 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 SLC29A2Q14542 456 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 CNBD1Q8NA66 436 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 EPS8L3Q8TE67 593 aaKnown RBP14.07□□□□□ -0.16
CHD1L-210ENST00000622533 GLG1Q92896 1179 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 NAF1Q96HR8 494 aaKnown RBP14.07□□□□□ -0.16
CHD1L-210ENST00000622533 PLCD4Q9BRC7 762 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 NKX1-2Q9UD57 310 aaPredicted RBP14.07□□□□□ -0.16
CHD1L-210ENST00000622533 TTC7AQ9ULT0 858 aaPredicted RBP14.07□□□□□ -0.16
CHD1L-210ENST00000622533 NENFQ9UMX5 172 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 SUGT1Q9Y2Z0 365 aa14.07□□□□□ -0.16
CHD1L-210ENST00000622533 PPP1R11O60927 126 aaPredicted RBP14.06□□□□□ -0.16
CHD1L-210ENST00000622533 ACTN1P12814 892 aa14.06□□□□□ -0.16
CHD1L-210ENST00000622533 AKR1B1P15121 316 aa14.06□□□□□ -0.16
CHD1L-210ENST00000622533 EIF3BP55884 814 aaKnown RBP14.06□□□□□ -0.16
CHD1L-210ENST00000622533 PRPF4BQ13523 1007 aaKnown RBP14.06□□□□□ -0.16
CHD1L-210ENST00000622533 BMT2Q1RMZ1 405 aa14.06□□□□□ -0.16
CHD1L-210ENST00000622533 DPY19L2P1Q6NXN4 242 aa14.06□□□□□ -0.16
CHD1L-210ENST00000622533 SEC14L1Q92503 715 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms