RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PPP1R9AQ9ULJ8 1098 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 EMSYQ7Z589 1322 aa9.94□□□□□ -0.82
GGA3-223ENST00000621870 URB1O60287 2271 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 NFIBO00712 420 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MAGEB2O15479 319 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 RPS6KA5O75582 802 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 TRPA1O75762 1119 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 SGO2Q562F6 1265 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 C1orf228Q6PIY5 440 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 PLEKHH3Q7Z736 793 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 ANKRD42Q8N9B4 389 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MGARPQ8TDB4 240 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 GANCQ8TET4 914 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 ZWILCHQ9H900 591 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MKRN1Q9UHC7 482 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 PDS5AQ29RF7 1337 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 LGALS16A8MUM7 142 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 EBAG9O00559 213 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MAFGO15525 162 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 TFRCP02786 760 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 EPHB1P54762 984 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 NLRP11P59045 1033 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 PLCB4Q15147 1175 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 RNF180Q86T96 592 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 RIT2Q99578 217 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 CNOT8Q9UFF9 292 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 ANAPC7Q9UJX3 599 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 SNX9Q9Y5X1 595 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 GOLGA4Q13439 2230 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 PHLPP2Q6ZVD8 1323 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 EFCAB8A8MWE9 144 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MCF2LO15068 1137 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MOCS3O95396 460 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 PSMA2P25787 234 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 HOXA7P31268 230 aaPredicted RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 CTNNA1P35221 906 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 BASP1P80723 227 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 MXD4Q14582 209 aaPredicted RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 SETDB1Q15047 1291 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 APOBEC3HQ6NTF7 200 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 ZFPM1Q8IX07 1006 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 REEP2Q9BRK0 252 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 GINM1Q9NU53 330 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MAD2L2Q9UI95 211 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 AGAP1Q9UPQ3 857 aa9.93□□□□□ -0.82
GGA3-223ENST00000621870 MAP2P11137 1827 aaKnown RBP9.93□□□□□ -0.82
GGA3-223ENST00000621870 TBX3O15119 743 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 RGS16O15492 202 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 ADORA2BP29275 332 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 RGS2P41220 211 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 HERVK_113P62684 666 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 DGKDQ16760 1214 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 CYP4F22Q6NT55 531 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 EFCAB12Q6NXP0 572 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 GPD1LQ8N335 351 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 FBXL13Q8NEE6 735 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 TARS2Q9BW92 718 aaKnown RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 BCL2L12Q9HB09 334 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 DPYSL4O14531 572 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 STK4Q13043 487 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 LAMC2Q13753 1193 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 ARID5BQ14865 1188 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 DRAP1Q14919 205 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 ARL13BQ3SXY8 428 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 FBXO16Q8IX29 292 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 AFG1LQ8WV93 481 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 MOV10L1Q9BXT6 1211 aaKnown RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 PASKQ96RG2 1323 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 ESYT2A0FGR8 921 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 HBP1O60381 514 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 MOCS2O96007 188 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 TAL1P17542 331 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 TCF7P36402 384 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 ACTR2P61160 394 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 CACNB2Q08289 660 aaPredicted RBP9.92□□□□□ -0.82
GGA3-223ENST00000621870 EMC2Q15006 297 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 PCSK1NQ9UHG2 260 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 HPS5Q9UPZ3 1129 aa9.92□□□□□ -0.82
GGA3-223ENST00000621870 MYMKA6NI61 221 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 ZMYND10O75800 440 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 CTDNEP1O95476 244 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 MYBP10242 640 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 CYP2C8P10632 490 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 ZC2HC1CQ53FD0 456 aaPredicted RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 PPP1R2P3Q6NXS1 205 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 DARS2Q6PI48 645 aaKnown RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 SRGAP1Q7Z6B7 1085 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 NBPF11Q86T75 865 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 MAP3K14Q99558 947 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 SPATC1LQ9H0A9 340 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 PRG3Q9Y2Y8 225 aaPredicted RBP9.91□□□□□ -0.82
GGA3-223ENST00000621870 DAAM1Q9Y4D1 1078 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 UBE4BO95155 1302 aa9.91□□□□□ -0.82
GGA3-223ENST00000621870 LRRC53A6NM62 1247 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms