RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SESTD1Q86VW0 696 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 KIF18AQ8NI77 898 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 ASAP3Q8TDY4 903 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 ATP6V0A1Q93050 837 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 CPB2Q96IY4 423 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 POLR3CQ9BUI4 534 aaPredicted RBP11.51□□□□□ -0.57
VPS11-208ENST00000621676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS11-208ENST00000621676 PIK3R2O00459 728 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 CCDC175P0C221 793 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 KRT5P13647 590 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 SMTNP53814 917 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 MIS18BP1Q6P0N0 1132 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 WDR59Q6PJI9 974 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 NPLOC4Q8TAT6 608 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 LRRC27Q9C0I9 530 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
VPS11-208ENST00000621676 XPNPEP1Q9NQW7 623 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 CACNG4Q9UBN1 327 aa11.51□□□□□ -0.57
VPS11-208ENST00000621676 GSTTP1A0A1W2PQM5 241 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 RHOXF2BP0C7M4 288 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 KRT76Q01546 638 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 PASD1Q8IV76 773 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 FAM114A1Q8IWE2 563 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 ZNF397Q8NF99 534 aaPredicted RBP11.5□□□□□ -0.57
VPS11-208ENST00000621676 MBOAT7Q96N66 472 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 RHOXF2Q9BQY4 288 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 VCANP13611 3396 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 ARHGAP6O43182 974 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
VPS11-208ENST00000621676 MOCS3O95396 460 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 TNFSF9P41273 254 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 WNT7BP56706 349 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 KLHL30Q0D2K2 578 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 PPIL2Q13356 520 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 EMC2Q15006 297 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 ELF2Q15723 593 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 LLGL2Q6P1M3 1020 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 OTUD6AQ7L8S5 288 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 GPR142Q7Z601 462 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 TMEM139Q8IV31 216 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 CNGA4Q8IV77 575 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 PDCL3Q9H2J4 239 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 TUFT1Q9NNX1 390 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 IMPACTQ9P2X3 320 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 MCM3APO60318 1980 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 TNPO2O14787 897 aaKnown RBP11.5□□□□□ -0.57
VPS11-208ENST00000621676 CALUO43852 315 aaPredicted RBP11.5□□□□□ -0.57
VPS11-208ENST00000621676 FARP2O94887 1054 aaPredicted RBP11.5□□□□□ -0.57
VPS11-208ENST00000621676 FTCDO95954 541 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 C6orf222P0C671 652 aaPredicted RBP11.5□□□□□ -0.57
VPS11-208ENST00000621676 EEF1GP26641 437 aaKnown RBP11.5□□□□□ -0.57
VPS11-208ENST00000621676 CASQ1P31415 396 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 GJC1P36383 396 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 PPP3CAQ08209 521 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 SKIDA1Q1XH10 827 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 GLRA4Q5JXX5 417 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 SPRYD7Q5W111 196 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 RIOX2Q8IUF8 465 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 MNS1Q8NEH6 495 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 IFT74Q96LB3 600 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
VPS11-208ENST00000621676 CXCL11O14625 94 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 ADCY6O43306 1168 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 PHACTR2O75167 634 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 NDUFA10O95299 355 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 KRT13P13646 458 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 TFAMQ00059 246 aaKnown RBP11.49□□□□□ -0.57
VPS11-208ENST00000621676 SPA17Q15506 151 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 REXO1L1PQ8IX06 675 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 HAUS4Q9H6D7 363 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 ARHGAP20Q9P2F6 1191 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 MYO1AQ9UBC5 1043 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 ADRB2P07550 413 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 CETPP11597 493 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 CDC25BP30305 580 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 NFX1Q12986 1120 aaKnown RBP11.49□□□□□ -0.57
VPS11-208ENST00000621676 EFCAB12Q6NXP0 572 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 TMEM192Q8IY95 271 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 U2AF1L4Q8WU68 220 aaKnown RBP11.49□□□□□ -0.57
VPS11-208ENST00000621676 SEPT1Q8WYJ6 367 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 PCYT2Q99447 389 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 NXF1Q9UBU9 619 aaKnown RBP11.49□□□□□ -0.57
VPS11-208ENST00000621676 PFASO15067 1338 aa11.49□□□□□ -0.57
VPS11-208ENST00000621676 EDN1P05305 212 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 SUPT20HL2P0C7V6 817 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 INSRRP14616 1297 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 DAB2IPQ5VWQ8 1189 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 GLYCTKQ8IVS8 523 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 SLC30A5Q8TAD4 765 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 ZNF507Q8TCN5 953 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 PLEKHO2Q8TD55 490 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 ZBTB22O15209 634 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 MYL3P08590 195 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
VPS11-208ENST00000621676 ADSSP30520 456 aa11.48□□□□□ -0.57
VPS11-208ENST00000621676 PRPF4BQ13523 1007 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms