RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 STBD1O95210 358 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 TMEM206Q9H813 350 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 RNF181Q9P0P0 153 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 JRKLQ9Y4A0 524 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 WDR90Q96KV7 1748 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 GTF2BQ00403 316 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 BFSP1Q12934 665 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 CC2D1AQ6P1N0 951 aaPredicted RBP23.21■■□□□ 1.31
LIME1-210ENST00000621325 JPH1Q9HDC5 661 aaPredicted RBP23.21■■□□□ 1.31
LIME1-210ENST00000621325 ADARB2Q9NS39 739 aaKnown RBP23.21■■□□□ 1.31
LIME1-210ENST00000621325 FBXL5Q9UKA1 691 aa23.21■■□□□ 1.31
LIME1-210ENST00000621325 KLRC1P26715 233 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 SP2Q02086 613 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 RDM1Q8NG50 284 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 CALCOCO1Q9P1Z2 691 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 BTBD7Q9P203 1132 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 NCK2O43639 380 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 PPP2R5AQ15172 486 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 CCDC60Q8IWA6 550 aaPredicted RBP23.2■■□□□ 1.3
LIME1-210ENST00000621325 BSNDQ8WZ55 320 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
LIME1-210ENST00000621325 CEP170P1Q96L14 293 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 MYPNQ86TC9 1320 aa23.2■■□□□ 1.3
LIME1-210ENST00000621325 LCTP09848 1927 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 CCDC169A6NNP5 214 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 NCKAP1LP55160 1127 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 NAP1L1P55209 391 aaKnown RBP23.19■■□□□ 1.3
LIME1-210ENST00000621325 ALCAMQ13740 583 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 KIAA0753Q2KHM9 967 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 SULF1Q8IWU6 871 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 MSANTD4Q8NCY6 345 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 PSMB7Q99436 277 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 FAM53CQ9NYF3 392 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 SLC9A2Q9UBY0 812 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 SNX12Q9UMY4 172 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 SPATA31C2B4DYI2 1134 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 ACTR2P61160 394 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 MOB2Q70IA6 237 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 COG1Q8WTW3 980 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 NOX5Q96PH1 765 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 ALS2CR12Q96Q35 445 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 INTS2Q9H0H0 1204 aaKnown RBP23.19■■□□□ 1.3
LIME1-210ENST00000621325 SPON1Q9HCB6 807 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 HSPBP1Q9NZL4 362 aa23.19■■□□□ 1.3
LIME1-210ENST00000621325 FEZ2Q9UHY8 353 aaPredicted RBP23.19■■□□□ 1.3
LIME1-210ENST00000621325 LRRN2O75325 713 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 GFPT2O94808 682 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 NPTX2P47972 431 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 MYL7Q01449 175 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 NFRKBQ6P4R8 1299 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 LBX2Q6XYB7 198 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 ANKRD35Q8N283 1001 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 CLMNQ96JQ2 1002 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 TIPINQ9BVW5 301 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 ST6GALNAC4Q9H4F1 302 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 ELP3Q9H9T3 547 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 CSADQ9Y600 493 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 IRF6O14896 467 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 PRKCIP41743 596 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 PSEN1P49768 467 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 MYBPC2Q14324 1141 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 NAB2Q15742 525 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 TMEM161BQ8NDZ6 487 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 ZNF526Q8TF50 670 aaPredicted RBP23.18■■□□□ 1.3
LIME1-210ENST00000621325 KCNG1Q9UIX4 513 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 DNAJC12Q9UKB3 198 aa23.18■■□□□ 1.3
LIME1-210ENST00000621325 WDR81Q562E7 1941 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 GOLGA8IPA6NC78 632 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 GOLGA8JA6NMD2 632 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 PSAPP07602 524 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 CXCR5P32302 372 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 GADL1Q6ZQY3 521 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 PLEKHO2Q8TD55 490 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 ATP6V0A1Q93050 837 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 R3HDMLQ9H3Y0 253 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 PTPRFP10586 1907 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 PFASO15067 1338 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 NFASCO94856 1347 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 ANKRD63C9JTQ0 380 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 PPP3CAQ08209 521 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 GNPTABQ3T906 1256 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 ABHD15Q6UXT9 468 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 C12orf56Q8IXR9 622 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 RNF10Q8N5U6 811 aaKnown RBP23.17■■□□□ 1.3
LIME1-210ENST00000621325 CAGE1Q8TC20 777 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 OTUD5Q96G74 571 aa23.17■■□□□ 1.3
LIME1-210ENST00000621325 BZW2Q9Y6E2 419 aaKnown RBP23.17■■□□□ 1.3
LIME1-210ENST00000621325 EMSYQ7Z589 1322 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 SASH3O75995 380 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 KRT13P13646 458 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 PRKCEQ02156 737 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 BMS1Q14692 1282 aaKnown RBP23.16■■□□□ 1.3
LIME1-210ENST00000621325 C1orf220Q5T0J3 134 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 OTUD6AQ7L8S5 288 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 CREG2Q8IUH2 290 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 TXLNBQ8N3L3 684 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 XXYLT1Q8NBI6 393 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 CHST13Q8NET6 341 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 CDHR1Q96JP9 859 aa23.16■■□□□ 1.3
LIME1-210ENST00000621325 TLR10Q9BXR5 811 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms