RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TLE6Q9H808 572 aa26.9■■□□□ 1.9
ATXN3-253ENST00000621269 CD207Q9UJ71 328 aa26.9■■□□□ 1.9
ATXN3-253ENST00000621269 ATG2AQ2TAZ0 1938 aa26.9■■□□□ 1.9
ATXN3-253ENST00000621269 PI4K2BG5E9Z4 385 aa26.89■■□□□ 1.9
ATXN3-253ENST00000621269 TBX10O75333 385 aa26.89■■□□□ 1.9
ATXN3-253ENST00000621269 TRIM29Q14134 588 aa26.89■■□□□ 1.9
ATXN3-253ENST00000621269 EPHA7Q15375 998 aa26.89■■□□□ 1.9
ATXN3-253ENST00000621269 NCAPH2Q6IBW4 605 aa26.89■■□□□ 1.9
ATXN3-253ENST00000621269 RNF19AQ9NV58 838 aa26.89■■□□□ 1.9
ATXN3-253ENST00000621269 PUF60Q9UHX1 559 aaKnown RBP26.89■■□□□ 1.9
ATXN3-253ENST00000621269 PPME1Q9Y570 386 aa26.89■■□□□ 1.9
ATXN3-253ENST00000621269 MBTPS2O43462 519 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 POLGP54098 1239 aaPredicted RBP26.88■■□□□ 1.89
ATXN3-253ENST00000621269 NPEPPSP55786 919 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 TMEM31Q5JXX7 168 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 PDE12Q6L8Q7 609 aaKnown RBP26.88■■□□□ 1.89
ATXN3-253ENST00000621269 LRRC55Q6ZSA7 311 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 OTUD6AQ7L8S5 288 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 ADHFE1Q8IWW8 467 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 NSUN7Q8NE18 718 aaKnown RBP26.88■■□□□ 1.89
ATXN3-253ENST00000621269 NLRP4Q96MN2 994 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 ZNF558Q96NG5 402 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 PCDHGC5Q9Y5F6 944 aa26.88■■□□□ 1.89
ATXN3-253ENST00000621269 FAM205CA6NFA0 338 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 ZP2Q05996 745 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 SMAD4Q13485 552 aaKnown RBP26.87■■□□□ 1.89
ATXN3-253ENST00000621269 SMAD2Q15796 467 aaKnown RBP26.87■■□□□ 1.89
ATXN3-253ENST00000621269 KCNT2Q6UVM3 1135 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 KSR1Q8IVT5 923 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 C4orf19Q8IY42 314 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 TNFRSF25Q93038 417 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 LXNQ9BS40 222 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 LZTS1Q9Y250 596 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 BRWD1Q9NSI6 2320 aa26.87■■□□□ 1.89
ATXN3-253ENST00000621269 SKIP12755 728 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 YWHABP31946 246 aaKnown RBP26.86■■□□□ 1.89
ATXN3-253ENST00000621269 PPM1AP35813 382 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 RFC5P40937 340 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 ERVFC1P60507 584 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 PLCB3Q01970 1234 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 KRT17Q04695 432 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 CLLU1OSQ5K130 101 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 TWF2Q6IBS0 349 aaKnown RBP26.86■■□□□ 1.89
ATXN3-253ENST00000621269 CATSPER4Q7RTX7 472 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 ZNF598Q86UK7 904 aaKnown RBP26.86■■□□□ 1.89
ATXN3-253ENST00000621269 HELQQ8TDG4 1101 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 MRPS27Q92552 414 aaKnown RBP26.86■■□□□ 1.89
ATXN3-253ENST00000621269 ZSWIM4Q9H7M6 989 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 RGL1Q9NZL6 768 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 WRAP73Q9P2S5 460 aaPredicted RBP26.86■■□□□ 1.89
ATXN3-253ENST00000621269 PIN4Q9Y237 131 aaKnown RBP26.86■■□□□ 1.89
ATXN3-253ENST00000621269 COL4A3BPQ9Y5P4 624 aa26.86■■□□□ 1.89
ATXN3-253ENST00000621269 PLXNA4Q9HCM2 1894 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 NCOR1O75376 2440 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 FSD2A1L4K1 749 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 ALADP13716 330 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 ZNF579Q8NAF0 562 aaKnown RBP26.85■■□□□ 1.89
ATXN3-253ENST00000621269 DYDC2Q96IM9 177 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 MSLNLQ96KJ4 702 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 POP1Q99575 1024 aaKnown RBP26.85■■□□□ 1.89
ATXN3-253ENST00000621269 LRFN3Q9BTN0 628 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 MRPL9Q9BYD2 267 aaKnown RBP26.85■■□□□ 1.89
ATXN3-253ENST00000621269 SPG21Q9NZD8 308 aa26.85■■□□□ 1.89
ATXN3-253ENST00000621269 BTBD18B2RXH4 712 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 PER2O15055 1255 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 JAK2O60674 1132 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 GPR37L1O60883 481 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 PHKA2P46019 1235 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 FOSBP53539 338 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 CTTNQ14247 550 aaKnown RBP26.84■■□□□ 1.89
ATXN3-253ENST00000621269 CALCRLQ16602 461 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 DIS3L2Q8IYB7 885 aaKnown RBP26.84■■□□□ 1.89
ATXN3-253ENST00000621269 PRPF31Q8WWY3 499 aaKnown RBP26.84■■□□□ 1.89
ATXN3-253ENST00000621269 PSPC1Q8WXF1 523 aaKnown RBP26.84■■□□□ 1.89
ATXN3-253ENST00000621269 CDCA3Q99618 268 aaPredicted RBP26.84■■□□□ 1.89
ATXN3-253ENST00000621269 TRAIPQ9BWF2 469 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 DHX33Q9H6R0 707 aaKnown RBP26.84■■□□□ 1.89
ATXN3-253ENST00000621269 ENTPD7Q9NQZ7 604 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 CLEC1BQ9P126 229 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 RAPGEFL1Q9UHV5 662 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 PCDHA12Q9UN75 941 aa26.84■■□□□ 1.89
ATXN3-253ENST00000621269 C19orf67A6NJJ6 358 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 FSCN2O14926 492 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 SEC24BO95487 1268 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 ATF7P17544 494 aaPredicted RBP26.83■■□□□ 1.89
ATXN3-253ENST00000621269 PBX3P40426 434 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 CYP4A11Q02928 519 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 SPIRE1Q08AE8 756 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 XKR9Q5GH70 373 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 PLPP4Q5VZY2 271 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 TPH2Q8IWU9 490 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 TCP11Q8WWU5 503 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 RSPH1Q8WYR4 309 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 TMEM143Q96AN5 459 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 TCF25Q9BQ70 676 aa26.83■■□□□ 1.89
ATXN3-253ENST00000621269 GAS2O43903 313 aaKnown RBP26.82■■□□□ 1.88
ATXN3-253ENST00000621269 EYA4O95677 639 aa26.82■■□□□ 1.88
ATXN3-253ENST00000621269 SRGAP2CP0DJJ0 459 aa26.82■■□□□ 1.88
ATXN3-253ENST00000621269 RAB27AP51159 221 aa26.82■■□□□ 1.88
ATXN3-253ENST00000621269 COASYQ13057 564 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms