RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CASP10Q92851 521 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 FAM8A1Q9UBU6 413 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 COL4A3BPQ9Y5P4 624 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 CDC42BPGQ6DT37 1551 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 A0A1B0GW55 424 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DUX4L2P0CJ85 424 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DUX4L3P0CJ86 424 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DUX4L4P0CJ87 422 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DUX4L5P0CJ88 424 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DUX4L6P0CJ89 424 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DUX4L7P0CJ90 424 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 CTCFP49711 727 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 UBXN2AP68543 259 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 CYP4A11Q02928 519 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DMC1Q14565 340 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 PLEKHM3Q6ZWE6 761 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 TTC30AQ86WT1 665 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 GALNT4Q8N4A0 578 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 TRIM11Q96F44 468 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 KIF2CQ99661 725 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 PCIF1Q9H4Z3 704 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 ALG13Q9NP73 1137 aaKnown RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 PKD2L2Q9NZM6 624 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 HDAC6Q9UBN7 1215 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DUX4Q9UBX2 424 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 WDR64B1ANS9 1081 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 TCP11X1B4DZS4 312 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 NCK2O43639 380 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 LZTS3O60299 673 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 TAC1P20366 129 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 HNRNPH1P31943 449 aaKnown RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 RPS6P62753 249 aaKnown RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 MECOMQ03112 1051 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 PDIK1LQ8N165 341 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 INPP5DQ92835 1189 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 KIAA1024Q9UPX6 916 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 ORC4O43929 436 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 MFAP3LO75121 409 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 PPP6R2O75170 966 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 GOLGA8HP0CJ92 632 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 PSMC2P35998 433 aaKnown RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 UBE3CQ15386 1083 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DNAJC9Q8WXX5 260 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DHTKD1Q96HY7 919 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 KLHL25Q9H0H3 589 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 EPN3Q9H201 632 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 VPS11Q9H270 941 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 KRT37O76014 449 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 COPB2P35606 906 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 ZBED6P86452 979 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 DMP1Q13316 513 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 SMAD1Q15797 465 aaKnown RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 SLC13A1Q9BZW2 595 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 ATP8A2Q9NTI2 1148 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 ADCY9O60503 1353 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 JCADQ9P266 1359 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 PRDM15P57071 1507 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 TPP2P29144 1249 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TRIM16LQ309B1 348 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 PPHLN1Q8NEY8 458 aaKnown RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 OTULINQ96BN8 352 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 ZBED2Q9BTP6 218 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 RWDD2AQ9UIY3 292 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 CCPG1Q9ULG6 757 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 ZBTB24O43167 697 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 RAB14P61106 215 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 COPS2P61201 443 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TBL3Q12788 808 aaKnown RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 KIF2BQ8N4N8 673 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SNX19Q92543 992 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 C10orf88Q9H8K7 445 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SEMA3EO15041 775 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 PDIA3P30101 505 aaKnown RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 DRP2Q13474 957 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TAF1BQ53T94 588 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 DNAJC24Q6P3W2 148 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 NFRKBQ6P4R8 1299 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 FAM180AQ6UWF9 173 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 NLRX1Q86UT6 975 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 ZNF513Q8N8E2 541 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TEKT4Q8WW24 435 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 PSTPIP2Q9H939 334 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 PODXLO00592 558 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SNAP25P60880 206 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TXNRD1Q16881 649 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 CCDC142Q17RM4 750 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SLFN12Q8IYM2 578 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 CUEDC2Q9H467 287 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SESN1Q9Y6P5 492 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 BPIFB4P59827 614 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 KCTD2Q14681 263 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SLC39A14Q15043 492 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TBC1D9BQ66K14 1250 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SPATA21Q7Z572 469 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 MB21D1Q8N884 522 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms