RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 DPPA5A6NC42 116 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 FAM13AO94988 1023 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 SLC8A1P32418 973 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 TTMPQ5BVD1 217 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 MICALCLQ6ZW33 695 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 PEX26Q7Z412 305 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 TEKT4Q8WW24 435 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 CASKIN2Q8WXE0 1202 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 OSGEPQ9NPF4 335 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 HOMER2Q9NSB8 354 aa11.58□□□□□ -0.56
CDH1-214ENST00000621016 MEIS2O14770 477 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 ATP4AP20648 1035 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 EPHB4P54760 987 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 JAG1P78504 1218 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 GIT2Q14161 759 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 MMGT1Q8N4V1 131 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 GORASP1Q9BQQ3 440 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 PREBQ9HCU5 417 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 C2CD2Q9Y426 696 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 PHLPP1O60346 1717 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 KRIT1O00522 736 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 SORBS3O60504 671 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 NDUFB10O96000 172 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 AFPP02771 609 aaKnown RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 KNOP1Q1ED39 458 aaKnown RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 ERMNQ8TAM6 284 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 CCT8L2Q96SF2 557 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 AMNQ9BXJ7 453 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 GGT7Q9UJ14 662 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 USH1CQ9Y6N9 552 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 CASZ1Q86V15 1759 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 ZC3H4Q9UPT8 1303 aaKnown RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 TLDC2A0PJX2 215 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 TISP43B9A030 160 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 NR3C1P04150 777 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 HNRNPH3P31942 346 aaKnown RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 TUBP50607 506 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 CUL3Q13618 768 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 NAB2Q15742 525 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 ABCB5Q2M3G0 1257 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 ZCWPW2Q504Y3 356 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 ZNF746Q6NUN9 644 aaPredicted RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 LONP2Q86WA8 852 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 RBM46Q8TBY0 533 aaKnown RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 SNRNP27Q8WVK2 155 aaKnown RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 PRCCQ92733 491 aaPredicted RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 LBHD1Q9BQE6 289 aaPredicted RBP11.57□□□□□ -0.56
CDH1-214ENST00000621016 COA1Q9GZY4 146 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 KCTD10Q9H3F6 313 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
CDH1-214ENST00000621016 GAKO14976 1311 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 DYTNA2CJ06 578 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 OPA1O60313 960 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 EVI5O60447 810 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 PON1P27169 355 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 CDK17Q00537 523 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 TMEM132AQ24JP5 1023 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 ASTE1Q2TB18 679 aaPredicted RBP11.56□□□□□ -0.56
CDH1-214ENST00000621016 MAB21L3Q8N8X9 362 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 VIPAS39Q9H9C1 493 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 KDM3AQ9Y4C1 1321 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 NHSL1Q5SYE7 1610 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 MSH4O15457 936 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 SHOX2O60902 331 aaPredicted RBP11.56□□□□□ -0.56
CDH1-214ENST00000621016 MMP10P09238 476 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 EPB41P11171 864 aaKnown RBP11.56□□□□□ -0.56
CDH1-214ENST00000621016 AARSP49588 968 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDH1-214ENST00000621016 PHLDB2Q86SQ0 1253 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 CPXCR1Q8N123 301 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 PROM2Q8N271 834 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 DYDC2Q96IM9 177 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 OSBPL7Q9BZF2 842 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 PPP1R12CQ9BZL4 782 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 ACP6Q9NPH0 428 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 C15orf41Q9Y2V0 281 aa11.56□□□□□ -0.56
CDH1-214ENST00000621016 COL16A1Q07092 1604 aaPredicted RBP11.56□□□□□ -0.56
CDH1-214ENST00000621016 DAPK3O43293 454 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 ATP6V1G2O95670 118 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 SPATA31C1P0DKV0 1188 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 CHRNA5P30532 468 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 LSP1P33241 339 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 SLC12A3P55017 1021 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 CRY2Q49AN0 593 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 ACER1Q8TDN7 264 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 HOOK2Q96ED9 719 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 GJD4Q96KN9 370 aaPredicted RBP11.55□□□□□ -0.56
CDH1-214ENST00000621016 EIF2AK1Q9BQI3 630 aaKnown RBP11.55□□□□□ -0.56
CDH1-214ENST00000621016 GALNT8Q9NY28 637 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 NAGPAQ9UK23 515 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 PLAAQ9Y263 795 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.55□□□□□ -0.56
CDH1-214ENST00000621016 SSU72P8A0A1W2PR75 194 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 ZNF233A6NK53 670 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 AHCYL1O43865 530 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 SNHG28P0DPA3 235 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 HOXD13P35453 343 aa11.55□□□□□ -0.56
CDH1-214ENST00000621016 ROR2Q01974 943 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms