RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CASZ1Q86V15 1759 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 NPHP3-ACAD11A0A0J9YXS1 232 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 P4HA1P13674 534 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 ATP2A2P16615 1042 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 CCT5P48643 541 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 GUCY2DQ02846 1103 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 COASYQ13057 564 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 MTMR1Q13613 665 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 LMBRD2Q68DH5 695 aaPredicted RBP8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 FAM133AQ8N9E0 248 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 CCDC26Q8TAB7 109 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 NSMCE1Q8WV22 266 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 MTMR8Q96EF0 704 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 CALN1Q9BXU9 219 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 FBXO28Q9NVF7 368 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 SALL4Q9UJQ4 1053 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 FZD1Q9UP38 647 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 PHLPP1O60346 1717 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 THAP12O43422 761 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 C6orf222P0C671 652 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 PLA2G4BP0C869 781 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 COPB2P35606 906 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 GMPSP49915 693 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 ATP1A2P50993 1020 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 PDXDC1Q6P996 788 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 CDR2LQ86X02 465 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 MSL3Q8N5Y2 521 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 IQCDQ96DY2 449 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 IWS1Q96ST2 819 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 DNAJC17Q9NVM6 304 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 APC2O95996 2303 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 COL14A1Q05707 1796 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 POTEB3A0JP26 581 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 POTEFA5A3E0 1075 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 POTECB2RU33 542 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 F5H423 210 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 PALMO75781 387 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 RNF8O76064 485 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 POTEIP0CG38 1075 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 NSFP46459 744 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 AARSP49588 968 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 GNGT1P63211 74 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 POTEBQ6S5H4 581 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 POTEGQ6S5H5 508 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 POTEEQ6S8J3 1075 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 RSPH3Q86UC2 560 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 CCDC110Q8TBZ0 833 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 TRIM7Q9C029 511 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 EHD4Q9H223 541 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 EPB41L5Q9HCM4 733 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 SMYD2Q9NRG4 433 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 OPA1O60313 960 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 PPFIA4O75335 1185 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 OATP04181 439 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 CDK17Q00537 523 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 CACNB2Q08289 660 aaPredicted RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 RHPN2Q8IUC4 686 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 PASD1Q8IV76 773 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 BCAS4Q8TDM0 211 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 SREK1Q8WXA9 508 aaKnown RBP8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 KRT12Q99456 494 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 CAPS2Q9BXY5 557 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 KIF9Q9HAQ2 790 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 RGL1Q9NZL6 768 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 ZNRF3Q9ULT6 936 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 NFU1Q9UMS0 254 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
PTPDC1-204ENST00000620992 ZSCAN5CA6NGD5 496 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 H7C0C1 242 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 DYNC1LI2O43237 492 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 H2AFZP0C0S5 128 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ATP5OP48047 213 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 DENND2CQ68D51 928 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ZNF662Q6ZS27 426 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 H2AFVQ71UI9 128 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 OR6B3Q8NGW1 331 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ZKSCAN4Q969J2 545 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MTMR9Q96QG7 549 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 PURBQ96QR8 312 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 NACC1Q96RE7 527 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 NGRNQ9NPE2 291 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 RIC8AQ9NPQ8 531 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 EMILIN3Q9NT22 766 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MTMR4Q9NYA4 1195 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 GPR75-ASB3A0A0A6YYF3 556 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 PNMA6FA0A0J9YX94 578 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 AGPSO00116 658 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 SLC16A4O15374 487 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 HEXIM1O94992 359 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 FXR2P51116 673 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 EPHB4P54760 987 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 CLUL1Q15846 466 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ECM1Q16610 540 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 KCTD19Q17RG1 926 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MAP7D1Q3KQU3 841 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 CCDC14Q49A88 953 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 DNAAF5Q86Y56 855 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ADGRF4Q8IZF3 695 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MMGT1Q8N4V1 131 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms