RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KRT12Q99456 494 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 TTYH3Q9C0H2 523 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ADAM7Q9H2U9 754 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ETNK2Q9NVF9 386 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 STOML1Q9UBI4 398 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 BAZ2BQ9UIF8 2168 aaKnown RBP11.18□□□□□ -0.62
VPS11-207ENST00000620429 TNKSO95271 1327 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 BTBD19C9JJ37 291 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ZNF263O14978 683 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
VPS11-207ENST00000620429 KRT38O76015 456 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 GM2AP17900 193 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ERVK-9P63128 1117 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 TNNC1P63316 161 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
VPS11-207ENST00000620429 HLTFQ14527 1009 aaKnown RBP eCLIP11.18□□□□□ -0.62
VPS11-207ENST00000620429 RETREG2Q8NC44 543 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 SLC17A8Q8NDX2 589 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
VPS11-207ENST00000620429 TMEM237Q96Q45 408 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 CENPKQ9BS16 269 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 LRMDAQ9H2I8 198 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 DPH5Q9H2P9 285 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
VPS11-207ENST00000620429 DCLRE1BQ9H816 532 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 MLXIPQ9HAP2 919 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ABCF2Q9UG63 623 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 LNPEPQ9UIQ6 1025 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 PNMA2Q9UL42 364 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 TRIM33Q9UPN9 1127 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 EFR3BQ9Y2G0 817 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 CD2APQ9Y5K6 639 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 PNPLA7Q6ZV29 1317 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 TRIM43BA6NCK2 446 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 RGL2O15211 777 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 RAD51CO43502 376 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 ATP9BO43861 1147 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 KLRK1P26718 216 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 RCAN1P53805 252 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 CYP27A1Q02318 531 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 FITM2Q8N6M3 262 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 TBC1D16Q8TBP0 767 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 UBLCP1Q8WVY7 318 aaPredicted RBP11.17□□□□□ -0.62
VPS11-207ENST00000620429 MS4A14Q96JA4 679 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 OLFM3Q96PB7 478 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 PSMB7Q99436 277 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 IL1RAPL1Q9NZN1 696 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 CROTQ9UKG9 612 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 PNMA3Q9UL41 463 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 ZNF652Q9Y2D9 606 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 ARL2BPQ9Y2Y0 163 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 TAF1P21675 1872 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 ATP5HO75947 161 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 LCA5LO95447 670 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
VPS11-207ENST00000620429 RASA1P20936 1047 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 CCNFP41002 786 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 TMEM259Q4ZIN3 620 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 HOOK3Q86VS8 718 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 PGM2Q96G03 612 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 ABHD8Q96I13 439 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 DDX23Q9BUQ8 820 aaKnown RBP11.17□□□□□ -0.62
VPS11-207ENST00000620429 AGPAT5Q9NUQ2 364 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 TXLNGQ9NUQ3 528 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 INTS9Q9NV88 658 aaKnown RBP11.17□□□□□ -0.62
VPS11-207ENST00000620429 TBCCD1Q9NVR7 557 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
VPS11-207ENST00000620429 TMEM59LQ9UK28 342 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 USP20Q9Y2K6 914 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
VPS11-207ENST00000620429 HTR3EA5X5Y0 456 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 PJA2O43164 708 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 MCM7P33993 719 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 KLHDC7AQ5VTJ3 777 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 FAM13CQ8NE31 585 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 PCMTD1Q96MG8 357 aaPredicted RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 SETDB2Q96T68 719 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 TRAIPQ9BWF2 469 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 ETNK1Q9HBU6 452 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 SUCLA2Q9P2R7 463 aaPredicted RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 R3HDM2Q9Y2K5 976 aaKnown RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 PCDHA13Q9Y5I0 950 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 NCK2O43639 380 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 ALDH2P05091 517 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 GNAT2P19087 354 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 EEF1GP26641 437 aaKnown RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms