RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 GLYCTKQ8IVS8 523 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
TP53-225ENST00000619485 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 ACTRT1Q8TDG2 376 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 SELENOSQ9BQE4 189 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 SWAP70Q9UH65 585 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
TP53-225ENST00000619485 H0YGN5 161 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 IRF6O14896 467 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 CLK2P49760 499 aaKnown RBP11.23□□□□□ -0.61
TP53-225ENST00000619485 IKQ13123 557 aaPredicted RBP11.23□□□□□ -0.61
TP53-225ENST00000619485 KNOP1Q1ED39 458 aaKnown RBP11.23□□□□□ -0.61
TP53-225ENST00000619485 NBPF20Q3BBV1 942 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 DHX36Q9H2U1 1008 aaKnown RBP11.23□□□□□ -0.61
TP53-225ENST00000619485 SLC40A1Q9NP59 571 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 HAUS2Q9NVX0 235 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 NR2E1Q9Y466 385 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 NFS1Q9Y697 457 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 PSME4Q14997 1843 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 ZBTB5O15062 677 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 TRAPPC3O43617 180 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 KRT13P13646 458 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 POLD1P28340 1107 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 SMARCA1P28370 1054 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
TP53-225ENST00000619485 CHADLQ6NUI6 762 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 CCDC174Q6PII3 467 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 LRIG3Q6UXM1 1119 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 TMC3Q7Z5M5 1100 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 CATSPER3Q86XQ3 398 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 CACNA2D3Q8IZS8 1091 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 LMBR1Q8WVP7 490 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 AMFRQ9UKV5 643 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 DNM3Q9UQ16 869 aa11.23□□□□□ -0.61
TP53-225ENST00000619485 BZW2Q9Y6E2 419 aaKnown RBP11.23□□□□□ -0.61
TP53-225ENST00000619485 SPDYE3A6NKU9 549 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 NFKBIEO00221 500 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 MEIS2O14770 477 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 CALUO43852 315 aaPredicted RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 NR3C1P04150 777 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 GALCP54803 685 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 SLC12A3P55017 1021 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 BIRC3Q13489 604 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 MTMR3Q13615 1198 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 EDRF1Q3B7T1 1238 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 C10orf76Q5T2E6 689 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 GLG1Q92896 1179 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 SEC16BQ96JE7 1060 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 FMO2Q99518 471 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 ANO3Q9BYT9 981 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 BHMT2Q9H2M3 363 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
TP53-225ENST00000619485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.61
TP53-225ENST00000619485 SLC12A6Q9UHW9 1150 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 PNMA2Q9UL42 364 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 ATXN2Q99700 1313 aaKnown RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 FER1L6Q2WGJ9 1857 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 DDX3XO00571 662 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■■■■ 27.3
TP53-225ENST00000619485 BUB1BO60566 1050 aaPredicted RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 CTNND1O60716 968 aaKnown RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 TBCAO75347 108 aaKnown RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 PLTPP55058 493 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 MARSP56192 900 aaKnown RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 GIT2Q14161 759 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 GKAP1Q5VSY0 366 aaPredicted RBP11.22□□□□□ -0.61
TP53-225ENST00000619485 PSMD1Q99460 953 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
TP53-225ENST00000619485 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 CCDC188H7C350 402 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 DNM1LO00429 736 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 CHMP2AO43633 222 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 EVI5O60447 810 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 CAND2O75155 1236 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 LRRN2O75325 713 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 SHBGP04278 402 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 VIL1P09327 827 aaKnown RBP11.21□□□□□ -0.61
TP53-225ENST00000619485 R3HDM1Q15032 1099 aaKnown RBP11.21□□□□□ -0.61
TP53-225ENST00000619485 E2F5Q15329 346 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 ARHGAP44Q17R89 818 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 AADACL2Q6P093 401 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 YTHDF3Q7Z739 585 aaKnown RBP11.21□□□□□ -0.61
TP53-225ENST00000619485 NT5DC3Q86UY8 548 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 SYCE1Q8N0S2 351 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 SLC35G2Q8TBE7 412 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 CALR3Q96L12 384 aaKnown RBP11.21□□□□□ -0.61
TP53-225ENST00000619485 TMOD4Q9NZQ9 345 aa11.21□□□□□ -0.61
TP53-225ENST00000619485 CHORDC1Q9UHD1 332 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms