RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 JAG1P78504 1218 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 AGBL2Q5U5Z8 902 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 ZNF317Q96PQ6 595 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 GSDMAQ96QA5 445 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 QSER1Q2KHR3 1735 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 hCG_2014768A0A024R1R8 64 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 LBRQ14739 615 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 CCDC155Q8N6L0 562 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 DAGLBQ8NCG7 672 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 LRRC45Q96CN5 670 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 NDNQ99608 321 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 ZWILCHQ9H900 591 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 PPP1R11O60927 126 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 GH2P01242 217 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 SNHG28P0DPA3 235 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 IKQ13123 557 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 UCMAQ8WVF2 138 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 SALL4Q9UJQ4 1053 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 GDAQ9Y2T3 454 aa17.11■□□□□ 0.33
SEMA3B-214ENST00000619119 H0Y3Z8 333 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 FLT3P36888 993 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 TNNI2P48788 182 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 RSBN1LQ6PCB5 846 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 CDAN1Q8IWY9 1227 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 OPTNQ96CV9 577 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 MTRQ99707 1265 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 ABCB5Q2M3G0 1257 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 PIGWQ7Z7B1 504 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 RTKN2Q8IZC4 609 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 VCXQ9H320 206 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 PACSIN2Q9UNF0 486 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 FTCDO95954 541 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 ATP6V1C1P21283 382 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 RASSF7Q02833 373 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 SGSM1Q2NKQ1 1148 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 FOXB2Q5VYV0 432 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 NEK8Q86SG6 692 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 PHF24Q9UPV7 400 aa17.1■□□□□ 0.33
SEMA3B-214ENST00000619119 ASAP2O43150 1006 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 AKR1B10O60218 316 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 UBA7P41226 1012 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 ADCY7P51828 1080 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 CCNG1P51959 295 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 COPS2P61201 443 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 DLGAP5Q15398 846 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 MIPOL1Q8TD10 442 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 TMOD2Q9NZR1 351 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 RBM47A0AV96 593 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 GBP1P32455 592 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 ARL6IP4Q66PJ3 421 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 RETREG2Q8NC44 543 aa17.09■□□□□ 0.33
SEMA3B-214ENST00000619119 TECP42680 631 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 SERPINB4P48594 390 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 MIGA2Q7L4E1 593 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 IRF2BP1Q8IU81 584 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 MTMR8Q96EF0 704 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 IFT74Q96LB3 600 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 PRMT1Q99873 361 aaKnown RBP17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 RAB17Q9H0T7 212 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 CNOT10Q9H9A5 744 aaKnown RBP17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 LRRC42Q9Y546 428 aa17.08■□□□□ 0.33
SEMA3B-214ENST00000619119 PNMA6FA0A0J9YX94 578 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 TLDC2A0PJX2 215 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 ABLIM1O14639 778 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 LONP1P36776 959 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 MFSD4BQ5TF39 518 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 KLHDC7AQ5VTJ3 777 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 MYO3BQ8WXR4 1341 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 SART1O43290 800 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 TPD52L2O43399 206 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 ZNF189O75820 626 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 TDP2O95551 362 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 TXKP42681 527 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 KIF11P52732 1056 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 GPATCH4Q5T3I0 446 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 ARL10Q8N8L6 244 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 GJA10Q969M2 543 aa17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-214ENST00000619119 MOV10L1Q9BXT6 1211 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms