RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 EXOC8Q8IYI6 725 aa24.45■■□□□ 1.5
TRAF4-217ENST00000618771 P2RX5Q93086 422 aa24.45■■□□□ 1.5
TRAF4-217ENST00000618771 MTMR9Q96QG7 549 aa24.45■■□□□ 1.5
TRAF4-217ENST00000618771 EIF2AK1Q9BQI3 630 aaKnown RBP24.45■■□□□ 1.5
TRAF4-217ENST00000618771 FDXACB1Q9BRP7 624 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-217ENST00000618771 FOXP1Q9H334 677 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-217ENST00000618771 NSUN3Q9H649 340 aaKnown RBP24.45■■□□□ 1.5
TRAF4-217ENST00000618771 DHX33Q9H6R0 707 aaKnown RBP24.45■■□□□ 1.5
TRAF4-217ENST00000618771 ST18O60284 1047 aa24.44■■□□□ 1.5
TRAF4-217ENST00000618771 CSDE1O75534 798 aaKnown RBP24.44■■□□□ 1.5
TRAF4-217ENST00000618771 SSTR3P32745 418 aaPredicted RBP24.44■■□□□ 1.5
TRAF4-217ENST00000618771 XKR9Q5GH70 373 aa24.44■■□□□ 1.5
TRAF4-217ENST00000618771 NEK9Q8TD19 979 aa24.44■■□□□ 1.5
TRAF4-217ENST00000618771 NLRP4Q96MN2 994 aa24.44■■□□□ 1.5
TRAF4-217ENST00000618771 TMEM60Q9H2L4 133 aa24.44■■□□□ 1.5
TRAF4-217ENST00000618771 SLITRK3O94933 977 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 FGFR1P11362 822 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 SFPQP23246 707 aaKnown RBP eCLIP24.43■■□□□ 1.5
TRAF4-217ENST00000618771 NAALADL2Q58DX5 795 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 TCEAL5Q5H9L2 206 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 KSR1Q8IVT5 923 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 INO80BQ9C086 356 aaPredicted RBP24.43■■□□□ 1.5
TRAF4-217ENST00000618771 ALG13Q9NP73 1137 aaKnown RBP24.43■■□□□ 1.5
TRAF4-217ENST00000618771 BMP2KQ9NSY1 1161 aaPredicted RBP24.43■■□□□ 1.5
TRAF4-217ENST00000618771 DACT1Q9NYF0 836 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 PLAGL2Q9UPG8 496 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 COL4A3BPQ9Y5P4 624 aa24.43■■□□□ 1.5
TRAF4-217ENST00000618771 MUC6Q6W4X9 2439 aa24.42■■□□□ 1.5
TRAF4-217ENST00000618771 H3BQ06 376 aaPredicted RBP24.42■■□□□ 1.5
TRAF4-217ENST00000618771 ZBTB39O15060 712 aa24.42■■□□□ 1.5
TRAF4-217ENST00000618771 HOXA2O43364 376 aa24.42■■□□□ 1.5
TRAF4-217ENST00000618771 GNL2Q13823 731 aaKnown RBP24.42■■□□□ 1.5
TRAF4-217ENST00000618771 EMC2Q15006 297 aa24.42■■□□□ 1.5
TRAF4-217ENST00000618771 SPOUT1Q5T280 376 aaKnown RBP24.42■■□□□ 1.5
TRAF4-217ENST00000618771 ECHDC2Q86YB7 292 aa24.42■■□□□ 1.5
TRAF4-217ENST00000618771 PSPC1Q8WXF1 523 aaKnown RBP24.42■■□□□ 1.5
TRAF4-217ENST00000618771 TMEM143Q96AN5 459 aa24.42■■□□□ 1.5
TRAF4-217ENST00000618771 HSD17B14Q9BPX1 270 aa24.42■■□□□ 1.5
TRAF4-217ENST00000618771 GRXCR2A6NFK2 248 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 POTEMA6NI47 508 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 GAS2O43903 313 aaKnown RBP24.41■■□□□ 1.5
TRAF4-217ENST00000618771 LYPLA2O95372 231 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 ITGB1P05556 798 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 ORC2Q13416 577 aaPredicted RBP24.41■■□□□ 1.5
TRAF4-217ENST00000618771 EP400NLQ6ZTU2 488 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 NOSTRINQ8IVI9 506 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 KLHL23Q8NBE8 558 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 TMEM117Q9H0C3 514 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 CHST12Q9NRB3 414 aa24.41■■□□□ 1.5
TRAF4-217ENST00000618771 A0A0U1RQF3 1178 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 CSPG5O95196 566 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 ZNF174Q15697 407 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 RNF169Q8NCN4 708 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 TCP11Q8WWU5 503 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 PRPF31Q8WWY3 499 aaKnown RBP24.4■■□□□ 1.5
TRAF4-217ENST00000618771 MTRQ99707 1265 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 IFT122Q9HBG6 1241 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 AAASQ9NRG9 546 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 RNF19AQ9NV58 838 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 HCSTQ9UBK5 93 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 PCDHB12Q9Y5F1 795 aa24.4■■□□□ 1.5
TRAF4-217ENST00000618771 OR52Z1P0C646 297 aa24.39■■□□□ 1.49
TRAF4-217ENST00000618771 PUS10Q3MIT2 529 aaKnown RBP24.39■■□□□ 1.49
TRAF4-217ENST00000618771 TTC38Q5R3I4 469 aa24.39■■□□□ 1.49
TRAF4-217ENST00000618771 CATSPER4Q7RTX7 472 aa24.39■■□□□ 1.49
TRAF4-217ENST00000618771 ABI1Q8IZP0 508 aa24.39■■□□□ 1.49
TRAF4-217ENST00000618771 SPPL3Q8TCT6 385 aa24.39■■□□□ 1.49
TRAF4-217ENST00000618771 CCDC43Q96MW1 224 aaKnown RBP24.39■■□□□ 1.49
TRAF4-217ENST00000618771 ANKEF1Q9NU02 776 aa24.39■■□□□ 1.49
TRAF4-217ENST00000618771 TYW1Q9NV66 732 aaKnown RBP24.39■■□□□ 1.49
TRAF4-217ENST00000618771 PIN4Q9Y237 131 aaKnown RBP24.39■■□□□ 1.49
TRAF4-217ENST00000618771 EOMESO95936 686 aa24.38■■□□□ 1.49
TRAF4-217ENST00000618771 SRGAP2CP0DJJ0 459 aa24.38■■□□□ 1.49
TRAF4-217ENST00000618771 TRAPPC10P48553 1259 aa24.38■■□□□ 1.49
TRAF4-217ENST00000618771 LAMTOR4Q0VGL1 99 aa24.38■■□□□ 1.49
TRAF4-217ENST00000618771 CAMK1Q14012 370 aa24.38■■□□□ 1.49
TRAF4-217ENST00000618771 TWF2Q6IBS0 349 aaKnown RBP24.38■■□□□ 1.49
TRAF4-217ENST00000618771 PABPC5Q96DU9 382 aaKnown RBP24.38■■□□□ 1.49
TRAF4-217ENST00000618771 CASD1Q96PB1 797 aa24.38■■□□□ 1.49
TRAF4-217ENST00000618771 NOL7Q9UMY1 257 aaKnown RBP24.38■■□□□ 1.49
TRAF4-217ENST00000618771 KIF3AQ9Y496 699 aa24.38■■□□□ 1.49
TRAF4-217ENST00000618771 ATF7P17544 494 aaPredicted RBP24.37■■□□□ 1.49
TRAF4-217ENST00000618771 LAG3P18627 525 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 DNAJB1P25685 340 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 SRGAP1Q7Z6B7 1085 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 ZNF598Q86UK7 904 aaKnown RBP24.37■■□□□ 1.49
TRAF4-217ENST00000618771 FERMT3Q86UX7 667 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 LRRC43Q8N309 656 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 COLGALT1Q8NBJ5 622 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 TMX3Q96JJ7 454 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 TRAIPQ9BWF2 469 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 CWH43Q9H720 699 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 XPNPEP1Q9NQW7 623 aa24.37■■□□□ 1.49
TRAF4-217ENST00000618771 PIEZO1Q92508 2521 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 PRR33A8MZF0 331 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 ASAP2O43150 1006 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 CD2BP2O95400 341 aaKnown RBP24.36■■□□□ 1.49
TRAF4-217ENST00000618771 ALADP13716 330 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 U2AF2P26368 475 aaKnown RBP eCLIP24.36■■□□□ 1.491e-6■□□□□ 8.6
TRAF4-217ENST00000618771 TECP42680 631 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms