RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 STAMQ92783 540 aa21.84■■□□□ 1.09
UPF3A-211ENST00000618700 DRC1Q96MC2 740 aa21.84■■□□□ 1.09
UPF3A-211ENST00000618700 RSPH10B2B2RC85 870 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 ASAP2O43150 1006 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 IQCF3P0C7M6 154 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 RSPH10BP0C881 870 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 CYP2C18P33260 490 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 MCM4P33991 863 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 ZNF131P52739 623 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 NLRP11P59045 1033 aaKnown RBP21.83■■□□□ 1.09
UPF3A-211ENST00000618700 CDC42EP1Q00587 391 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 AMPD3Q01432 767 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 CAPSQ13938 189 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 MBTPS1Q14703 1052 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 KIZQ2M2Z5 673 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 ZNF410Q86VK4 478 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 RHPN2Q8IUC4 686 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 KSR1Q8IVT5 923 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 GRAMD1CQ8IYS0 662 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 CNNM3Q8NE01 707 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 PAGE5Q96GU1 130 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 C7orf25Q9BPX7 421 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 CELF4Q9BZC1 486 aaKnown RBP21.83■■□□□ 1.09
UPF3A-211ENST00000618700 LRRC27Q9C0I9 530 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 CDHR5Q9HBB8 845 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 POLD4Q9HCU8 107 aa21.83■■□□□ 1.09
UPF3A-211ENST00000618700 M0QZ92 97 aa21.82■■□□□ 1.08
UPF3A-211ENST00000618700 RAG1P15918 1043 aa21.82■■□□□ 1.08
UPF3A-211ENST00000618700 NLRP4Q96MN2 994 aa21.82■■□□□ 1.08
UPF3A-211ENST00000618700 TIGD1Q96MW7 591 aa21.82■■□□□ 1.08
UPF3A-211ENST00000618700 PPP1R16BQ96T49 567 aa21.82■■□□□ 1.08
UPF3A-211ENST00000618700 C17orf75Q9HAS0 396 aa21.82■■□□□ 1.08
UPF3A-211ENST00000618700 PRKAG2Q9UGJ0 569 aa21.82■■□□□ 1.08
UPF3A-211ENST00000618700 FRMD3A2A2Y4 597 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 KRT18P05783 430 aaKnown RBP21.81■■□□□ 1.08
UPF3A-211ENST00000618700 NAMPTP43490 491 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 AFMP43652 599 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 CRYBB1P53674 252 aaPredicted RBP21.81■■□□□ 1.08
UPF3A-211ENST00000618700 CCL23P55773 120 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 POU5F1BQ06416 359 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 GPNMBQ14956 572 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 MFSD5Q6N075 450 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 DYMQ7RTS9 669 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 ZNF668Q96K58 619 aaPredicted RBP21.81■■□□□ 1.08
UPF3A-211ENST00000618700 DCBLD2Q96PD2 775 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 DACT1Q9NYF0 836 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 PCDH10Q9P2E7 1040 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 ZMYND8Q9ULU4 1186 aaPredicted RBP21.81■■□□□ 1.08
UPF3A-211ENST00000618700 NR2E3Q9Y5X4 410 aa21.81■■□□□ 1.08
UPF3A-211ENST00000618700 A0A087WZ62 844 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 TBCAO75347 108 aaKnown RBP21.8■■□□□ 1.08
UPF3A-211ENST00000618700 PARNO95453 639 aaKnown RBP21.8■■□□□ 1.08
UPF3A-211ENST00000618700 MYL1P05976 194 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 PLS3P13797 630 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 CASP1P29466 404 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 TFDP1Q14186 410 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 PPP2R5AQ15172 486 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 FBXO47Q5MNV8 452 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 CDCA2Q69YH5 1023 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-211ENST00000618700 RNF149Q8NC42 400 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 TMEM40Q8WWA1 233 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 NLRP7Q8WX94 980 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 SCLYQ96I15 445 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 OSMRQ99650 979 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 FDXACB1Q9BRP7 624 aaPredicted RBP21.8■■□□□ 1.08
UPF3A-211ENST00000618700 NFKBIZQ9BYH8 718 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 OSBPL7Q9BZF2 842 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 IFT122Q9HBG6 1241 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 PCDHB8Q9UN66 801 aa21.8■■□□□ 1.08
UPF3A-211ENST00000618700 KINO60870 393 aaKnown RBP21.79■■□□□ 1.08
UPF3A-211ENST00000618700 NBNO60934 754 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 FAM13AO94988 1023 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 DARSP14868 501 aaKnown RBP21.79■■□□□ 1.08
UPF3A-211ENST00000618700 SYN1P17600 705 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 RFC2P35250 354 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 MDM2Q00987 491 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-211ENST00000618700 CUL4BQ13620 913 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 KANK3Q6NY19 840 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 ELOA2Q8IYF1 753 aaPredicted RBP21.79■■□□□ 1.08
UPF3A-211ENST00000618700 VWCEQ96DN2 955 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 IFT74Q96LB3 600 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 BLZF1Q9H2G9 400 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 PARVGQ9HBI0 331 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 GINS2Q9Y248 185 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 SQORQ9Y6N5 450 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 MYH11P35749 1972 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 ADGRA3Q8IWK6 1321 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 SCN5AQ14524 2016 aa21.79■■□□□ 1.08
UPF3A-211ENST00000618700 SFI1A8K8P3 1242 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 GTPBP6O43824 516 aaPredicted RBP21.78■■□□□ 1.08
UPF3A-211ENST00000618700 CXCL10P02778 98 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 SRGAP2CP0DJJ0 459 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 PHKA2P46019 1235 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 NPTX2P47972 431 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 PEX3P56589 373 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 PTENP60484 403 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 ASIC1P78348 528 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 DMP1Q13316 513 aaPredicted RBP21.78■■□□□ 1.08
UPF3A-211ENST00000618700 LPIN1Q14693 890 aa21.78■■□□□ 1.08
UPF3A-211ENST00000618700 GPT2Q8TD30 523 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms