RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 PDGFCQ9NRA1 345 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
CPEB1-216ENST00000618449 SLC16A4O15374 487 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 STRNO43815 780 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 NCKAP1LP55160 1127 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 NFIL3Q16649 462 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
CPEB1-216ENST00000618449 CCDC62Q6P9F0 684 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 HS2ST1Q7LGA3 356 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 HAUS6Q7Z4H7 955 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 GPR142Q7Z601 462 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 SYCP3Q8IZU3 236 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 GPR161Q8N6U8 529 aaKnown RBP12.33□□□□□ -0.44
CPEB1-216ENST00000618449 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 RABGGTAQ92696 567 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 HAUS4Q9H6D7 363 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 ARMCX3Q9UH62 379 aaPredicted RBP12.33□□□□□ -0.44
CPEB1-216ENST00000618449 IVNS1ABPQ9Y6Y0 642 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 TRPM7Q96QT4 1865 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 ARID2Q68CP9 1835 aa12.33□□□□□ -0.44
CPEB1-216ENST00000618449 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 STAT5BP51692 787 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 KRT83P78385 493 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 GTF2BQ00403 316 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 ALCAMQ13740 583 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 SRGAP1Q7Z6B7 1085 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 SAPCD2Q86UD0 394 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 CCDC170Q8IYT3 715 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 ABRAQ8N0Z2 381 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 CEP112Q8N8E3 955 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 BSNDQ8WZ55 320 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 KIFAP3Q92845 792 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 COPS5Q92905 334 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 ST6GALNAC4Q9H4F1 302 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 TRIM10Q9UDY6 481 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 FAM184BQ9ULE4 1060 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 GUCA1BQ9UMX6 200 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 CCDC169A6NNP5 214 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 IGF2BP3O00425 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPEB1-216ENST00000618449 EPHB6O15197 1021 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
CPEB1-216ENST00000618449 TXNP10599 105 aaKnown RBP12.32□□□□□ -0.44
CPEB1-216ENST00000618449 NPTX2P47972 431 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 CDK17Q00537 523 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 KCNMA1Q12791 1236 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 KIAA1328Q86T90 577 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 MCPH1Q8NEM0 835 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 AFAP1L1Q8TED9 768 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 GPR20Q99678 358 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 KIFC3Q9BVG8 833 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 TMEM206Q9H813 350 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 NHEJ1Q9H9Q4 299 aaPredicted RBP12.32□□□□□ -0.44
CPEB1-216ENST00000618449 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
CPEB1-216ENST00000618449 FAM207AQ9NSI2 230 aaPredicted RBP12.32□□□□□ -0.44
CPEB1-216ENST00000618449 TISP43B9A030 160 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 EPB41P11171 864 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 SMTNP53814 917 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 DMP1Q13316 513 aaPredicted RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 ZNF662Q6ZS27 426 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 DHX37Q8IY37 1157 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 KRT222Q8N1A0 295 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 TMEM161BQ8NDZ6 487 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 ACCSQ96QU6 501 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 FAM53CQ9NYF3 392 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 CPA4Q9UI42 421 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 EIF3CLB5ME19 914 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 IPO7O95373 1038 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 CYP2J2P51589 502 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 GRB14Q14449 540 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 TTLL4Q14679 1199 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 EMC2Q15006 297 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 CCDC122Q5T0U0 273 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 FAM160B1Q5W0V3 765 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 RGMBQ6NW40 437 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 TMCO3Q6UWJ1 677 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 GOLGA5Q8TBA6 731 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 SCFD2Q8WU76 684 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 JAKMIP2Q96AA8 810 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 BORCS6Q96GS4 357 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 SPATA33Q96N06 139 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 CEP89Q96ST8 783 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 EIF3CQ99613 913 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 NTPCRQ9BSD7 190 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 EPC1Q9H2F5 836 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 C17orf75Q9HAS0 396 aa12.31□□□□□ -0.44
CPEB1-216ENST00000618449 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 PUF60Q9UHX1 559 aaKnown RBP12.31□□□□□ -0.44
CPEB1-216ENST00000618449 HNRNPH3P31942 346 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms