RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 RABGGTAQ92696 567 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 GDAP1L1Q96MZ0 367 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 RBAKQ9NYW8 714 aaPredicted RBP14.96□□□□□ -0.01
CIITA-213ENST00000618327 HSPBP1Q9NZL4 362 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.96□□□□□ -0.01
CIITA-213ENST00000618327 ADM5C9JUS6 153 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 VWA5AO00534 786 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.01
CIITA-213ENST00000618327 CCDC89Q8N998 374 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 PDCD2LQ9BRP1 358 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 TXNDC16Q9P2K2 825 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 SUCLA2Q9P2R7 463 aaPredicted RBP14.96□□□□□ -0.01
CIITA-213ENST00000618327 ADGRG1Q9Y653 693 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 GOLGA8SH3BPF8 625 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 IFNB1P01574 187 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 ACTR2P61160 394 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 PCNX4Q63HM2 1172 aa14.96□□□□□ -0.01
CIITA-213ENST00000618327 EIF3DO15371 548 aaKnown RBP eCLIP14.96□□□□□ -0.02
CIITA-213ENST00000618327 TBC1D12O60347 775 aa14.96□□□□□ -0.02
CIITA-213ENST00000618327 CXCR5P32302 372 aa14.96□□□□□ -0.02
CIITA-213ENST00000618327 FUCA2Q9BTY2 467 aa14.96□□□□□ -0.02
CIITA-213ENST00000618327 DYNC1LI2O43237 492 aaPredicted RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 HOXD10P28358 340 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 GPC3P51654 580 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 MXD4Q14582 209 aaPredicted RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 CCDC117Q8IWD4 279 aaPredicted RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 RUSC1Q9BVN2 902 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 PXMP2Q9NR77 195 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 GOLGA6BA6NDN3 693 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 GFPT1Q06210 699 aaPredicted RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 DNAJC24Q6P3W2 148 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 AFAP1L1Q8TED9 768 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 OPTNQ96CV9 577 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 ZFYVE28Q9HCC9 887 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 YDJCA8MPS7 323 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 FBXL13Q8NEE6 735 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 HEXIM2Q96MH2 286 aaKnown RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 GCOM2Q9BZD3 368 aaPredicted RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 ITIH6Q6UXX5 1313 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 PRKCBP05771 671 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 CD44P16070 742 aaKnown RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 MUTP22033 750 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 RFC5P40937 340 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 ZNF699Q32M78 642 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 ZNF394Q53GI3 561 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 TWF2Q6IBS0 349 aaKnown RBP14.95□□□□□ -0.02
CIITA-213ENST00000618327 RNF14Q9UBS8 474 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 FZD1Q9UP38 647 aa14.95□□□□□ -0.02
CIITA-213ENST00000618327 CXCL11O14625 94 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 PTPRAP18433 802 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 RFX1P22670 979 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 BFSP1Q12934 665 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 TATDN1Q6P1N9 297 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 PDXDC1Q6P996 788 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 RHOT2Q8IXI1 618 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 PPFIBP2Q8ND30 876 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 CYP2W1Q8TAV3 490 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 GRK7Q8WTQ7 553 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 GLIS2Q9BZE0 524 aaPredicted RBP14.94□□□□□ -0.02
CIITA-213ENST00000618327 FAM169AQ9Y6X4 670 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 UBE4BO95155 1302 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 KIAA0391O15091 583 aaKnown RBP14.94□□□□□ -0.02
CIITA-213ENST00000618327 CYP2B6P20813 491 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 GABPAQ06546 454 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 PPFIA1Q13136 1202 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 SETDB1Q15047 1291 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 MAP1SQ66K74 1059 aaPredicted RBP14.94□□□□□ -0.02
CIITA-213ENST00000618327 MROH8Q9H579 483 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 COMMD10Q9Y6G5 202 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 RNASELQ05823 741 aaKnown RBP14.94□□□□□ -0.02
CIITA-213ENST00000618327 CCDC14Q49A88 953 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 TMEM270Q6UE05 265 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 RSAD2Q8WXG1 361 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 KRT12Q99456 494 aa14.94□□□□□ -0.02
CIITA-213ENST00000618327 FAM86B1E9PN63 330 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 PGRMC1O00264 195 aaKnown RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 FAM86B2P0C5J1 330 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 IFRD2Q12894 506 aaPredicted RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 MTMR3Q13615 1198 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 METTL23Q86XA0 190 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 SREK1Q8WXA9 508 aaKnown RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 FAM149B1Q96BN6 582 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 USP27XA6NNY8 438 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 GUCY2FP51841 1108 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 KAZNQ674X7 775 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 SPATC1LQ9H0A9 340 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 DPH5Q9H2P9 285 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 KCNK9Q9NPC2 374 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 EIF3CLB5ME19 914 aaKnown RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 PGK2P07205 417 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 CIITAP33076 1130 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
CIITA-213ENST00000618327 EIF3CQ99613 913 aaKnown RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 ROBO3Q96MS0 1386 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 NDC80O14777 642 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 OATP04181 439 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms