RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PPP1R16BQ96T49 567 aa25.08■■□□□ 1.61
CBWD3-213ENST00000618217 NTPCRQ9BSD7 190 aaKnown RBP25.08■■□□□ 1.61
CBWD3-213ENST00000618217 PPP1R12CQ9BZL4 782 aa25.08■■□□□ 1.61
CBWD3-213ENST00000618217 PRDM5Q9NQX1 630 aaPredicted RBP25.08■■□□□ 1.61
CBWD3-213ENST00000618217 TRPV2Q9Y5S1 764 aa25.08■■□□□ 1.61
CBWD3-213ENST00000618217 SCN5AQ14524 2016 aa25.08■■□□□ 1.61
CBWD3-213ENST00000618217 A0A087WZ62 844 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 IQCF3P0C7M6 154 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 SRGAP2CP0DJJ0 459 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 PLS3P13797 630 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 CRYBB1P53674 252 aaPredicted RBP25.08■■□□□ 1.6
CBWD3-213ENST00000618217 DPYDQ12882 1025 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 ZNF410Q86VK4 478 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 FDXACB1Q9BRP7 624 aaPredicted RBP25.08■■□□□ 1.6
CBWD3-213ENST00000618217 OSBPL7Q9BZF2 842 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 PARVGQ9HBI0 331 aa25.08■■□□□ 1.6
CBWD3-213ENST00000618217 KLRC4O43908 158 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 NAMPTP43490 491 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 NPTX2P47972 431 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 POSTNQ15063 836 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 IFNLR1Q8IU57 520 aaPredicted RBP25.07■■□□□ 1.6
CBWD3-213ENST00000618217 RNF149Q8NC42 400 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 NLRP4Q96MN2 994 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 FIZ1Q96SL8 496 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 LTBP2Q14767 1821 aa25.07■■□□□ 1.6
CBWD3-213ENST00000618217 RBAK-RBAKDNI3L0D1 243 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 TBCAO75347 108 aaKnown RBP25.06■■□□□ 1.6
CBWD3-213ENST00000618217 FAM13AO94988 1023 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 PEX3P56589 373 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 PTENP60484 403 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 ASIC1P78348 528 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 PNOCQ13519 176 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 PPP2R5AQ15172 486 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 TMEM40Q8WWA1 233 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 SPIRE2Q8WWL2 714 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 IFT74Q96LB3 600 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 NFKBIZQ9BYH8 718 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 PANK4Q9NVE7 773 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 PCDH10Q9P2E7 1040 aa25.06■■□□□ 1.6
CBWD3-213ENST00000618217 TNRC18O15417 2968 aaPredicted RBP25.06■■□□□ 1.6
CBWD3-213ENST00000618217 PVALEFA0A1B0GWK0 134 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 M0QZ92 97 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 CAPN15O75808 1086 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 MBD3O95983 291 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 IDEP14735 1019 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 CCL23P55773 120 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 EHHADHQ08426 723 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 TFDP1Q14186 410 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 CDCA2Q69YH5 1023 aaPredicted RBP25.05■■□□□ 1.6
CBWD3-213ENST00000618217 UNC13DQ70J99 1090 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 MYCT1Q8N699 235 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 NLRP7Q8WX94 980 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 CCDC34Q96HJ3 373 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 OSMRQ99650 979 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 LARSQ9P2J5 1176 aaKnown RBP25.05■■□□□ 1.6
CBWD3-213ENST00000618217 GINS2Q9Y248 185 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 ADGRA3Q8IWK6 1321 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 TET1Q8NFU7 2136 aa25.05■■□□□ 1.6
CBWD3-213ENST00000618217 DARSP14868 501 aaKnown RBP25.04■■□□□ 1.6
CBWD3-213ENST00000618217 RAG1P15918 1043 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 GAP43P17677 238 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 EIF4BP23588 611 aaKnown RBP25.04■■□□□ 1.6
CBWD3-213ENST00000618217 FBXO47Q5MNV8 452 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 ODR4Q5SWX8 454 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 CCDC65Q8IXS2 484 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 SPATA20Q8TB22 786 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 VWCEQ96DN2 955 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 SCLYQ96I15 445 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 MINDY3Q9H8M7 445 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 SQORQ9Y6N5 450 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 LRRIQ4A6NIV6 560 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 NBNO60934 754 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 COASYQ13057 564 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 DMP1Q13316 513 aaPredicted RBP25.04■■□□□ 1.6
CBWD3-213ENST00000618217 MFSD5Q6N075 450 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 SFR1Q86XK3 245 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 KIFC3Q9BVG8 833 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 CLSTN2Q9H4D0 955 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 ZHX3Q9H4I2 956 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 ARHGAP28Q9P2N2 729 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 SEL1LQ9UBV2 794 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 PRKAG2Q9UGJ0 569 aa25.04■■□□□ 1.6
CBWD3-213ENST00000618217 NCKAP1LP55160 1127 aa25.03■■□□□ 1.6
CBWD3-213ENST00000618217 LPIN1Q14693 890 aa25.03■■□□□ 1.6
CBWD3-213ENST00000618217 KCNN1Q92952 543 aa25.03■■□□□ 1.6
CBWD3-213ENST00000618217 GCOM2Q9BZD3 368 aaPredicted RBP25.03■■□□□ 1.6
CBWD3-213ENST00000618217 OLFML3Q9NRN5 406 aa25.03■■□□□ 1.6
CBWD3-213ENST00000618217 KCNG1Q9UIX4 513 aa25.03■■□□□ 1.6
CBWD3-213ENST00000618217 CCDC169A6NNP5 214 aa25.02■■□□□ 1.6
CBWD3-213ENST00000618217 TRAK2O60296 914 aa25.02■■□□□ 1.6
CBWD3-213ENST00000618217 CSDE1O75534 798 aaKnown RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 PARNO95453 639 aaKnown RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 SYN1P17600 705 aa25.02■■□□□ 1.6
CBWD3-213ENST00000618217 PHKA2P46019 1235 aa25.02■■□□□ 1.6
CBWD3-213ENST00000618217 HERC4Q5GLZ8 1057 aaPredicted RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 TMEM161BQ8NDZ6 487 aa25.02■■□□□ 1.6
CBWD3-213ENST00000618217 ERCC4Q92889 916 aaPredicted RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 SCLT1Q96NL6 688 aa25.02■■□□□ 1.6
CBWD3-213ENST00000618217 AGO3Q9H9G7 860 aaKnown RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 KMT5AQ9NQR1 393 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms