RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ADAM9Q13443 819 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 UGCGQ16739 394 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 LY6KQ17RY6 165 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 TSR1Q2NL82 804 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 UTP14CQ5TAP6 766 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 IQSEC1Q6DN90 963 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 Q7L0L9 218 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 EPM2AIP1Q7L775 607 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 ZNF720Q7Z2F6 126 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 CCDC60Q8IWA6 550 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 FBXO16Q8IX29 292 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 ARRDC4Q8NCT1 418 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 BBXQ8WY36 941 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 MAML3Q96JK9 1138 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 TINF2Q9BSI4 451 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 NUP58Q9BVL2 599 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 VPS16Q9H269 839 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 FAM184BQ9ULE4 1060 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 ITIH6Q6UXX5 1313 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 PHLPP2Q6ZVD8 1323 aa18.44■□□□□ 0.54
TRAPPC3-210ENST00000617904 A0A1W2PQC6 194 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 LGALS16A8MUM7 142 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 RSPH10B2B2RC85 870 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 ZBTB39O15060 712 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 RSPH10BP0C881 870 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 MYBPC2Q14324 1141 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 MAN2A1Q16706 1144 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 BRDTQ58F21 947 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 ANO5Q75V66 913 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 DEFB123Q8N688 67 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 TCP11Q8WWU5 503 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 FGD4Q96M96 766 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 NAP1L5Q96NT1 182 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 NIFKQ9BYG3 293 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 GBP3Q9H0R5 595 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 ST6GALNAC4Q9H4F1 302 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 TAB2Q9NYJ8 693 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 EMSYQ7Z589 1322 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 LCTP09848 1927 aa18.43■□□□□ 0.54
TRAPPC3-210ENST00000617904 KIAA1217Q5T5P2 1943 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 SFI1A8K8P3 1242 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 SLC16A3O15427 465 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 EPB41P11171 864 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 PTGS1P23219 599 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 PMS1P54277 932 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 NFIL3Q16649 462 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 MTERF2Q49AM1 385 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 CCDC62Q6P9F0 684 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 TRMT1LQ7Z2T5 733 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 CNGA4Q8IV77 575 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 SPIRE2Q8WWL2 714 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 CCDC51Q96ER9 411 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 PCMTD1Q96MG8 357 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 KMT5AQ9NQR1 393 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 ZNF215Q9UL58 517 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 FRMD4BQ9Y2L6 1034 aa18.42■□□□□ 0.54
TRAPPC3-210ENST00000617904 GSTTP1A0A1W2PQM5 241 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 SORBS3O60504 671 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 LGR5O75473 907 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 PRPF6O94906 941 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 MYBP10242 640 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 NR2F2P24468 414 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 TBC1D8BQ0IIM8 1120 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 ZCWPW2Q504Y3 356 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 PLA2G4FQ68DD2 849 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 SLC39A5Q6ZMH5 540 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 MAEAQ7L5Y9 396 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 RETREG2Q8NC44 543 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 ZNF397Q8NF99 534 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 EMID1Q96A84 441 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 GPR20Q99678 358 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 KCTD10Q9H3F6 313 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 MTMR10Q9NXD2 777 aa18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRAPPC3-210ENST00000617904 LRRC37A2A6NM11 1700 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 CCDC169A6NNP5 214 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 KBTBD13C9JR72 458 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 AKR1B15C9JRZ8 316 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 CCP110O43303 1012 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 ZNF862O60290 1169 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 NPEPPSP55786 919 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 PEX3P56589 373 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 ACVR2BQ13705 512 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 HAUS6Q7Z4H7 955 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 FRMD5Q7Z6J6 570 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 LRRC8AQ8IWT6 810 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 LBHD1Q9BQE6 289 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 MKNK1Q9BUB5 465 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 ERAP1Q9NZ08 941 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 ZHX1Q9UKY1 873 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 ATP11BQ9Y2G3 1177 aa18.4■□□□□ 0.54
TRAPPC3-210ENST00000617904 HBP1O60381 514 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 NR3C1P04150 777 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 NMT1P30419 496 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 PSMC2P35998 433 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 NCKAP1LP55160 1127 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 MARSP56192 900 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 STRN3Q13033 797 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 MAPK7Q13164 816 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms