RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 RNF149Q8NC42 400 aa13.84□□□□□ -0.19
DDB2-213ENST00000617847 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
DDB2-213ENST00000617847 ASAP3Q8TDY4 903 aa13.84□□□□□ -0.19
DDB2-213ENST00000617847 GUCD1Q96NT3 240 aa13.84□□□□□ -0.19
DDB2-213ENST00000617847 ADAM2Q99965 735 aa13.84□□□□□ -0.19
DDB2-213ENST00000617847 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
DDB2-213ENST00000617847 DNM3Q9UQ16 869 aa13.84□□□□□ -0.19
DDB2-213ENST00000617847 SRPRBQ9Y5M8 271 aaKnown RBP13.84□□□□□ -0.19
DDB2-213ENST00000617847 CSDE1O75534 798 aaKnown RBP13.83□□□□□ -0.2
DDB2-213ENST00000617847 UPP2O95045 317 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 FGFR4P22455 802 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
DDB2-213ENST00000617847 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
DDB2-213ENST00000617847 FAM189BP81408 668 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 TAP1Q03518 808 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 CAPSQ13938 189 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 BECN1Q14457 450 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 PPP2R2DQ66LE6 453 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 NPAS4Q8IUM7 802 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.2
DDB2-213ENST00000617847 GPRC5CQ9NQ84 441 aa13.83□□□□□ -0.2
DDB2-213ENST00000617847 BRD1O95696 1058 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 SRGAP2CP0DJJ0 459 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 UBA7P41226 1012 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 TFDP1Q14186 410 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 LINC00301Q8NCQ3 95 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 ZNF689Q96CS4 500 aaPredicted RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 FAM161BQ96MY7 647 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 ZNF396Q96N95 335 aaPredicted RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 ELAC1Q9H777 363 aaKnown RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 CHD9Q3L8U1 2897 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 DGKIO75912 1065 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 YEATS4O95619 227 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 STAG3L1P0CL83 205 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 PHKA2P46019 1235 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 C1orf186Q6ZWK4 172 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 MAEAQ7L5Y9 396 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 SYT2Q8N9I0 419 aaPredicted RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 LRRC15Q8TF66 581 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
DDB2-213ENST00000617847 TRAIPQ9BWF2 469 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 CHD7Q9P2D1 2997 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 ZDHHC9Q9Y397 364 aa13.82□□□□□ -0.2
DDB2-213ENST00000617847 CDH23Q9H251 3354 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 PPP6R2O75170 966 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 SLC12A3P55017 1021 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.29e-6■■■□□ 18.2
DDB2-213ENST00000617847 ZRSR1Q15695 479 aaKnown RBP13.81□□□□□ -0.2
DDB2-213ENST00000617847 FAM102BQ5T8I3 360 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 ATL3Q6DD88 541 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 RINT1Q6NUQ1 792 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 USP49Q70CQ1 688 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 KRI1Q8N9T8 703 aaKnown RBP13.81□□□□□ -0.2
DDB2-213ENST00000617847 BSNDQ8WZ55 320 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 CALML4Q96GE6 196 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 CLIC6Q96NY7 704 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 YME1L1Q96TA2 773 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 PLIN2Q99541 437 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 CDX2Q99626 313 aaPredicted RBP13.81□□□□□ -0.2
DDB2-213ENST00000617847 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
DDB2-213ENST00000617847 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
DDB2-213ENST00000617847 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
DDB2-213ENST00000617847 FNDC1Q4ZHG4 1894 aaPredicted RBP13.8□□□□□ -0.2
DDB2-213ENST00000617847 ADGRA3Q8IWK6 1321 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 A0A0U1RQF3 1178 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 ERVK-21P61565 698 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 MBTD1Q05BQ5 628 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
DDB2-213ENST00000617847 STK38Q15208 465 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 CDCA2Q69YH5 1023 aaPredicted RBP13.8□□□□□ -0.2
DDB2-213ENST00000617847 SPRED2Q7Z698 418 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 ECHDC2Q86YB7 292 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 DAW1Q8N136 415 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 KIFAP3Q92845 792 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 EPSTI1Q96J88 318 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 RUSC1Q9BVN2 902 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 BLOC1S4Q9NUP1 217 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 PCDHB7Q9Y5E2 793 aa13.8□□□□□ -0.2
DDB2-213ENST00000617847 SPTLC2O15270 562 aa13.79□□□□□ -0.2
DDB2-213ENST00000617847 LINC00271P0C7V0 271 aa13.79□□□□□ -0.2
DDB2-213ENST00000617847 PLA2G4BP0C869 781 aa13.79□□□□□ -0.2
DDB2-213ENST00000617847 PLCG1P19174 1290 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms