RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CBWD5Q5RIA9 395 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 LDLRAD1Q5T700 205 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 EEPD1Q7L9B9 569 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 ZSWIM2Q8NEG5 633 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 KIFAP3Q92845 792 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 ZNF408Q9H9D4 720 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 XPNPEP1Q9NQW7 623 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 AIPL1Q9NZN9 384 aa18.95■□□□□ 0.62
PCDHGC3-205ENST00000617641 MYH9P35579 1960 aaKnown RBP18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 MACROD2A1Z1Q3 448 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 OSBPP22059 807 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 SMTNP53814 917 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 KIF5AQ12840 1032 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 BFSP1Q12934 665 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 PPP2R5AQ15172 486 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 MTERF2Q49AM1 385 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 GJB7Q6PEY0 223 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 KMT5AQ9NQR1 393 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 PDLIM7Q9NR12 457 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 CLEC11AQ9Y240 323 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 LRRC37A2A6NM11 1700 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 DGAT1O75907 488 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 ATG7O95352 703 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 ATP4AP20648 1035 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 XKR3Q5GH77 459 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 C12orf56Q8IXR9 622 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 SLC17A8Q8NDX2 589 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 SPAG5Q96R06 1193 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 ZNF302Q9NR11 478 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 HSPBP1Q9NZL4 362 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 TBX20Q9UMR3 447 aa18.94■□□□□ 0.62
PCDHGC3-205ENST00000617641 ZC3H4Q9UPT8 1303 aaKnown RBP18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 DENND3A2RUS2 1198 aa18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 KLHL30Q0D2K2 578 aa18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 FGD4Q96M96 766 aa18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 TSGA10Q9BZW7 698 aa18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 ATP6V0A4Q9HBG4 840 aa18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 CGNQ9P2M7 1197 aaKnown RBP18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 CDC23Q9UJX2 597 aa18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 MAFBQ9Y5Q3 323 aaPredicted RBP18.93■□□□□ 0.62
PCDHGC3-205ENST00000617641 ANKRD63C9JTQ0 380 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 FARP2O94887 1054 aaPredicted RBP18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 TFRCP02786 760 aaKnown RBP18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 MAGEA1P43355 309 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 MAP1SQ66K74 1059 aaPredicted RBP18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 MCPH1Q8NEM0 835 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 SLC10A4Q96EP9 437 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 KRT13P13646 458 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 DLG4P78352 724 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 SNAPC2Q13487 334 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 WDR78Q5VTH9 848 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 IQCEQ6IPM2 695 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 MAP4K3Q8IVH8 894 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 PDCL2Q8N4E4 241 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 XXYLT1Q8NBI6 393 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 EHBP1Q8NDI1 1231 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 TMEM174Q8WUU8 243 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 SPIRE2Q8WWL2 714 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 ADGRA3Q8IWK6 1321 aa18.92■□□□□ 0.62
PCDHGC3-205ENST00000617641 RBAK-RBAKDNI3L0D1 243 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 ENC1O14682 589 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 OATP04181 439 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 MYL7Q01449 175 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 IRF2BP2Q7Z5L9 587 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 MMP19Q99542 508 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 POLR3FQ9H1D9 316 aaPredicted RBP18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 FBXL5Q9UKA1 691 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 GSTTP1A0A1W2PQM5 241 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 GOLGA8IPA6NC78 632 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 GOLGA8JA6NMD2 632 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 EFCAB8A8MWE9 144 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 SOCS7O14512 581 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 CYP2C8P10632 490 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 ADSSP30520 456 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 JAM2P57087 298 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 LY6KQ17RY6 165 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 INTS8Q75QN2 995 aaKnown RBP18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 UBXN4Q92575 508 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 SECISBP2LQ93073 1101 aaKnown RBP18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 HVCN1Q96D96 273 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 PCYT2Q99447 389 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 NTPCRQ9BSD7 190 aaKnown RBP18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 MLXIPQ9HAP2 919 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 C17orf75Q9HAS0 396 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 EXOC7Q9UPT5 735 aa18.91■□□□□ 0.62
PCDHGC3-205ENST00000617641 GGPS1O95749 300 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 PNMA6AP0CW24 399 aaPredicted RBP18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 COPB2P35606 906 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 VAMP7P51809 220 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 AMPD2Q01433 879 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 KCTD2Q14681 263 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 EMC2Q15006 297 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 INTS2Q9H0H0 1204 aaKnown RBP18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 MYO6Q9UM54 1294 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 A0A087X0T9 212 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 IGKV6D-21A0A0A0MT36 114 aa18.9■□□□□ 0.62
PCDHGC3-205ENST00000617641 ATP1A1P05023 1023 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms