RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 CASD1Q96PB1 797 aa25■■□□□ 1.59
ARHGEF1-223ENST00000617585 EIF2AK1Q9BQI3 630 aaKnown RBP25■■□□□ 1.59
ARHGEF1-223ENST00000617585 CWH43Q9H720 699 aa25■■□□□ 1.59
ARHGEF1-223ENST00000617585 IFT122Q9HBG6 1241 aa25■■□□□ 1.59
ARHGEF1-223ENST00000617585 FGFR1P11362 822 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 FGFR4P22455 802 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 SFPQP23246 707 aaKnown RBP eCLIP24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 DNAJB1P25685 340 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 UBE3AQ05086 875 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 RABEP1Q15276 862 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 AAASQ9NRG9 546 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 TYW1Q9NV66 732 aaKnown RBP24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 PCDHB12Q9Y5F1 795 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 COL4A3BPQ9Y5P4 624 aa24.99■■□□□ 1.59
ARHGEF1-223ENST00000617585 ASAP2O43150 1006 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 CSDE1O75534 798 aaKnown RBP24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 ATF7P17544 494 aaPredicted RBP24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 TXKP42681 527 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 POLGP54098 1239 aaPredicted RBP24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 GUCY1B3Q02153 619 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 CYP4A11Q02928 519 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 CSPP1Q1MSJ5 1256 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 KSR1Q8IVT5 923 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 TCP11Q8WWU5 503 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 PSPC1Q8WXF1 523 aaKnown RBP24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 RSPH1Q8WYR4 309 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 TMEM60Q9H2L4 133 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 ANKEF1Q9NU02 776 aa24.98■■□□□ 1.59
ARHGEF1-223ENST00000617585 ZBTB39O15060 712 aa24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 XRCC6P12956 609 aaKnown RBP eCLIP24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 KCNA5P22460 613 aa24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 HYAL1Q12794 435 aa24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 PUS10Q3MIT2 529 aaKnown RBP24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 LRRC55Q6ZSA7 311 aa24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 TPH2Q8IWU9 490 aa24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 POF1BQ8WVV4 589 aa24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 PRPF31Q8WWY3 499 aaKnown RBP24.97■■□□□ 1.59
ARHGEF1-223ENST00000617585 ZNF623O75123 536 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 LAG3P18627 525 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 LTBRP36941 435 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 EMC2Q15006 297 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 XKR9Q5GH70 373 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 SRGAP1Q7Z6B7 1085 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 COLGALT1Q8NBJ5 622 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 TMEM143Q96AN5 459 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 NLRP4Q96MN2 994 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 NECAB3Q96P71 396 aaPredicted RBP24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 XPNPEP1Q9NQW7 623 aa24.96■■□□□ 1.59
ARHGEF1-223ENST00000617585 SKIP12755 728 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 IBSPP21815 317 aaPredicted RBP24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 PHKA2P46019 1235 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 TRAPPC10P48553 1259 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 POU5F1BQ06416 359 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 LAMTOR4Q0VGL1 99 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 CLLU1OSQ5K130 101 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 FERMT3Q86UX7 667 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 LRRC43Q8N309 656 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 FAM184AQ8NB25 1140 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 MTRQ99707 1265 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 HCSTQ9UBK5 93 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 LZTS1Q9Y250 596 aa24.95■■□□□ 1.58
ARHGEF1-223ENST00000617585 SPATA31C1P0DKV0 1188 aa24.94■■□□□ 1.58
ARHGEF1-223ENST00000617585 U2AF2P26368 475 aaKnown RBP eCLIP24.94■■□□□ 1.585e-6■■■□□ 17.8
ARHGEF1-223ENST00000617585 MCM7P33993 719 aa24.94■■□□□ 1.58
ARHGEF1-223ENST00000617585 PLCB3Q01970 1234 aa24.94■■□□□ 1.58
ARHGEF1-223ENST00000617585 IFNLR1Q8IU57 520 aaPredicted RBP24.94■■□□□ 1.58
ARHGEF1-223ENST00000617585 NOSTRINQ8IVI9 506 aa24.94■■□□□ 1.58
ARHGEF1-223ENST00000617585 AGPAT5Q9NUQ2 364 aa24.94■■□□□ 1.58
ARHGEF1-223ENST00000617585 GRXCR2A6NFK2 248 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 POTEMA6NI47 508 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 DGAT1O75907 488 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 FGF18O76093 207 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 IRS1P35568 1242 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 RARRES1P49788 294 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 MXD4Q14582 209 aaPredicted RBP24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 PCBP1Q15365 356 aaKnown RBP eCLIP24.93■■□□□ 1.581e-6■■■■■ 41.2
ARHGEF1-223ENST00000617585 SPOUT1Q5T280 376 aaKnown RBP24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 CATSPER4Q7RTX7 472 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 ABI1Q8IZP0 508 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 PPP2R3CQ969Q6 453 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 MINDY3Q9H8M7 445 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 TUFT1Q9NNX1 390 aa24.93■■□□□ 1.58
ARHGEF1-223ENST00000617585 ST18O60284 1047 aa24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 RAB27AP51159 221 aa24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 ADAM15Q13444 863 aa24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 PDE12Q6L8Q7 609 aaKnown RBP24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 POLR3CQ9BUI4 534 aaPredicted RBP24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 FAM105AQ9NUU6 356 aa24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 CLDND1Q9NY35 253 aa24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 PIN4Q9Y237 131 aaKnown RBP24.92■■□□□ 1.58
ARHGEF1-223ENST00000617585 OR52Z1P0C646 297 aa24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 SRGAP2CP0DJJ0 459 aa24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 ATP2B1P20020 1258 aa24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 HOXA11P31270 313 aaPredicted RBP24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 ARL2P36404 184 aa24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 TTC38Q5R3I4 469 aa24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 TWF2Q6IBS0 349 aaKnown RBP24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 PTCRAQ6ISU1 281 aaPredicted RBP24.91■■□□□ 1.58
ARHGEF1-223ENST00000617585 KCNT2Q6UVM3 1135 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms