RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CLPTM1O96005 669 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 FAM228BP0C875 321 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ABL2P42684 1182 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 KCNJ1P48048 391 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 DDB1Q16531 1140 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 RDH13Q8NBN7 331 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 FAM13CQ8NE31 585 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ATP6V0A1Q93050 837 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 C6orf50Q9HD87 102 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 NKX1-2Q9UD57 310 aaPredicted RBP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 TDRKHQ9Y2W6 561 aaKnown RBP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 SALL1Q9NSC2 1324 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 COQ9O75208 318 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ALOX15P16050 662 aaPredicted RBP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 RPL13P26373 211 aaKnown RBP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 PMS1P54277 932 aaKnown RBP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 MTTPP55157 894 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 FAM26FQ5R3K3 315 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 NLRP9Q7RTR0 991 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 SLC25A41Q8N5S1 370 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ETNK2Q9NVF9 386 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 SLC12A6Q9UHW9 1150 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ZNF148Q9UQR1 794 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 SCG2P13521 617 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ZNF76P36508 570 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 PBX1P40424 430 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 STK4Q13043 487 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 TCIRG1Q13488 830 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 CNGA3Q16281 694 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 CLEC4GQ6UXB4 293 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ZFAND2BQ8WV99 257 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 DOLKQ9UPQ8 538 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 ABCC12Q96J65 1359 aa14.49□□□□□ -0.09
PPP4R3B-205ENST00000616288 XDHP47989 1333 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 FAM187AA6NFU0 413 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 GIPC1O14908 333 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 VAV1P15498 845 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 PDE6AP16499 860 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 USP11P51784 963 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 POLGP54098 1239 aaPredicted RBP14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 MARK2Q7KZI7 788 aaKnown RBP14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 FITM2Q8N6M3 262 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 SSU72P8A0A1W2PR75 194 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 TRIM43BA6NCK2 446 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 LRRN2O75325 713 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 KRT75O95678 551 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 PTPN4P29074 926 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 ACAP1Q15027 740 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 RBM26Q5T8P6 1007 aaKnown RBP14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 ANKRD2Q9GZV1 360 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 UNC13BO14795 1591 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 ASXL2Q76L83 1435 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 GOLGA8RI6L899 631 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 PYGMP11217 842 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 NT5DC1Q5TFE4 455 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 PALM2Q8IXS6 379 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 OLFML3Q9NRN5 406 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 PCMTD2Q9NV79 361 aa14.48□□□□□ -0.09
PPP4R3B-205ENST00000616288 FAM47DPA6NHR8 397 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 SFI1A8K8P3 1242 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 TNFRSF8P28908 595 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 LIFRP42702 1097 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 CCR3P51677 355 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 ATP1A4Q13733 1029 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 FAM47AQ5JRC9 791 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 ATP11CQ8NB49 1132 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 LY9Q9HBG7 655 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 SLC12A4Q9UP95 1085 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 SOS2Q07890 1332 aaPredicted RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 A0A087X0B3 334 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 RNMTO43148 476 aaKnown RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 PLEKHA8P1O95397 391 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 TPD52P55327 224 aaPredicted RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 KRT81Q14533 505 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 TMEM259Q4ZIN3 620 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 NLRP7Q8WX94 980 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 TRAIPQ9BWF2 469 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 MRPL46Q9H2W6 279 aaKnown RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 F8W031 263 aaPredicted RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 P4HA2O15460 535 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 APOEP02649 317 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 OR52Z1P0C646 297 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 NR2F2P24468 414 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 NOP14P78316 857 aaKnown RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 C10orf76Q5T2E6 689 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 MIGA2Q7L4E1 593 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 PATL1Q86TB9 770 aaKnown RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 FAM89AQ96GI7 184 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 CFAP57Q96MR6 1250 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 NDUFA13Q9P0J0 144 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 TRMT112Q9UI30 125 aaKnown RBP14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 CDC42BPBQ9Y5S2 1711 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 GNA14O95837 355 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 HOXC9P31274 260 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 CNPY1Q3B7I2 92 aa14.47□□□□□ -0.09
PPP4R3B-205ENST00000616288 LIN52Q52LA3 116 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms