RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CYP4F22Q6NT55 531 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 NSUN6Q8TEA1 469 aaKnown RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 MKL1Q969V6 931 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 MRRFQ96E11 262 aaKnown RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 AGBL1Q96MI9 1066 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 HSD17B14Q9BPX1 270 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 NOC2LQ9Y3T9 749 aaKnown RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 SPTA1P02549 2419 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 DLG5Q8TDM6 1919 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 INO80B-WBP1J3KQ70 363 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 RASGRF2O14827 1237 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 TTI1O43156 1089 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 SORBS3O60504 671 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 MAPK4P31152 587 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 VAMP7P51809 220 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 CASP5P51878 434 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 TMEM119Q4V9L6 283 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 INPP4AQ96PE3 977 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 C11orf70Q9BRQ4 267 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 INO80BQ9C086 356 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 TUFT1Q9NNX1 390 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 APEX2Q9UBZ4 518 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 PARP2Q9UGN5 583 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 ODF2LQ9ULJ1 636 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 CD2APQ9Y5K6 639 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 RAD51CO43502 376 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ARP10275 920 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ATF7P17544 494 aaPredicted RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 CNGA1P29973 690 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 CIITAP33076 1130 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 IRX3P78415 501 aaPredicted RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 GJB7Q6PEY0 223 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZNF720Q7Z2F6 126 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 SRLQ86TD4 932 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 KSR1Q8IVT5 923 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 METTL13Q8N6R0 699 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ANKRD42Q8N9B4 389 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 FBXO25Q8TCJ0 367 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PIK3R5Q8WYR1 880 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 CBWD1Q9BRT8 395 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PLAAQ9Y263 795 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 SGO2Q562F6 1265 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 EEPD1Q7L9B9 569 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 MAIP1Q8WWC4 291 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 IQCGQ9H095 443 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 INTS2Q9H0H0 1204 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ADAM22Q9P0K1 906 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ANAPC7Q9UJX3 599 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZBTB39O15060 712 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 GBP1P32455 592 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 EIF3BP55884 814 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZCWPW2Q504Y3 356 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 VSIG1Q86XK7 387 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZIM3Q96PE6 472 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PAGR1Q9BTK6 254 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 TTYH3Q9C0H2 523 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ANKFY1Q9P2R3 1169 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 GABBR1Q9UBS5 961 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZNF70Q9UC06 446 aaPredicted RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 CHORDC1Q9UHD1 332 aaPredicted RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PTPN22Q9Y2R2 807 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PCDHGC5Q9Y5F6 944 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 NKRFO15226 690 aaKnown RBP eCLIP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ECEL1O95672 775 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 TMEM191BP0C7N4 346 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 TMEM253P0C7T8 217 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 TAL1P17542 331 aaPredicted RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ALDH3A1P30838 453 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 KCNJ1P48048 391 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 GUCY1A3Q02108 690 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ATP6V1G3Q96LB4 118 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 KCNMB3Q9NPA1 279 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PCDHAC2Q9Y5I4 1007 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 GTPBP10A4D1E9 387 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 GRID2IPA4D2P6 1211 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 DDX3XO00571 662 aaKnown RBP eCLIP6.07□□□□□ -1.443e-20■■□□□ 13.6
SYNCRIP-204ENST00000616122 PON1P27169 355 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 STX2P32856 288 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZBTB16Q05516 673 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 SLC17A8Q8NDX2 589 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 OSGEPQ9NPF4 335 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 DNAJC17Q9NVM6 304 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 KCND2Q9NZV8 630 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZBTB22O15209 634 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 SLC16A3O15427 465 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PPP1R11O60927 126 aaPredicted RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 SLITRK3O94933 977 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 KRT19P08727 400 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ITGA4P13612 1032 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 POLR2BP30876 1174 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 KCNMA1Q12791 1236 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZNF394Q53GI3 561 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 SNRNP48Q6IEG0 339 aaKnown RBP6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 TAOK1Q7L7X3 1001 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PHLDB2Q86SQ0 1253 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 OR2W6PQ8NHA6 318 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 LPAR1Q92633 364 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 MPHOSPH6Q99547 160 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms