RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 UGGT1Q9NYU2 1555 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 PITPNM2Q9BZ72 1349 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 GCLMP48507 274 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 MRPS35P82673 323 aaKnown RBP20.11■□□□□ 0.81
SPAST-203ENST00000615843 GPS1Q13098 491 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 TRIM67Q6ZTA4 783 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 CEP19Q96LK0 163 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 DPYDQ12882 1025 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 SLC18A3Q16572 532 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 ING2Q9H160 280 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 SERPINB13Q9UIV8 391 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 PFASO15067 1338 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 SSU72P8A0A1W2PR75 194 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 MECOMQ03112 1051 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 KRT17Q04695 432 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 CCDC92Q53HC0 331 aaPredicted RBP20.1■□□□□ 0.81
SPAST-203ENST00000615843 RARS2Q5T160 578 aaKnown RBP20.1■□□□□ 0.81
SPAST-203ENST00000615843 NUDCD3Q8IVD9 361 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 KIF2BQ8N4N8 673 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 ATP11CQ8NB49 1132 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 KANSL2Q9H9L4 492 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 TRIM33Q9UPN9 1127 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 ZNF746Q6NUN9 644 aaPredicted RBP20.1■□□□□ 0.81
SPAST-203ENST00000615843 LARGE2Q8N3Y3 721 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 GFM2Q969S9 779 aaKnown RBP20.1■□□□□ 0.81
SPAST-203ENST00000615843 MRPL40Q9NQ50 206 aaKnown RBP20.1■□□□□ 0.81
SPAST-203ENST00000615843 KPNA7A9QM74 516 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 ADSSL1Q8N142 457 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 KIFC3Q9BVG8 833 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 TRABDQ9H4I3 376 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 ZBTB1Q9Y2K1 713 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 ANGPTL3Q9Y5C1 460 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 GOLGA8CPA6NN73 597 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 RAD51CO43502 376 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 ABCD1P33897 745 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 TAF1BQ53T94 588 aaPredicted RBP20.1■□□□□ 0.81
SPAST-203ENST00000615843 IVNS1ABPQ9Y6Y0 642 aa20.1■□□□□ 0.81
SPAST-203ENST00000615843 MAN1A2O60476 641 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 IL6STP40189 918 aaPredicted RBP20.09■□□□□ 0.81
SPAST-203ENST00000615843 MED21Q13503 144 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 HIC1Q14526 733 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 POLR3CQ9BUI4 534 aaPredicted RBP20.09■□□□□ 0.81
SPAST-203ENST00000615843 RNF103-CHMP3A0A140T963 221 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 TLR3O15455 904 aaKnown RBP20.09■□□□□ 0.81
SPAST-203ENST00000615843 MYLK4Q86YV6 388 aaPredicted RBP20.09■□□□□ 0.81
SPAST-203ENST00000615843 HACE1Q8IYU2 909 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 PIGOQ8TEQ8 1089 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 INTS2Q9H0H0 1204 aaKnown RBP20.09■□□□□ 0.81
SPAST-203ENST00000615843 WWP1Q9H0M0 922 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 EHD2Q9NZN4 543 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 CRYMQ14894 314 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 ERP27Q96DN0 273 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 PRDM4Q9UKN5 801 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 LEMD3Q9Y2U8 911 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 ZNF233A6NK53 670 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 SPDYE16A6NNV3 312 aaPredicted RBP20.09■□□□□ 0.81
SPAST-203ENST00000615843 SPDYE2Q495Y8 402 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 GJA3Q9Y6H8 435 aa20.09■□□□□ 0.81
SPAST-203ENST00000615843 PI4K2BG5E9Z4 385 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 ALX1Q15699 326 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 FAM160B1Q5W0V3 765 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 WDR93Q6P2C0 686 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 XDHP47989 1333 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 IGF2BP3O00425 579 aaKnown RBP eCLIP20.08■□□□□ 0.81
SPAST-203ENST00000615843 GUCY1A2P33402 732 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 CDK8P49336 464 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 ORC2Q13416 577 aaPredicted RBP20.08■□□□□ 0.81
SPAST-203ENST00000615843 TFDP1Q14186 410 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 KDM7AQ6ZMT4 941 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 FBXL13Q8NEE6 735 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 GIPC2Q8TF65 315 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 C11orf70Q9BRQ4 267 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 DBR1Q9UK59 544 aaKnown RBP20.08■□□□□ 0.81
SPAST-203ENST00000615843 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 L1RE1Q9UN81 338 aa20.08■□□□□ 0.81
SPAST-203ENST00000615843 USP42Q9H9J4 1324 aaKnown RBP20.08■□□□□ 0.8
SPAST-203ENST00000615843 LAMC1P11047 1609 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 BMP3P12645 472 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 KIF19Q2TAC6 998 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 VPS11Q9H270 941 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 SMG5Q9UPR3 1016 aaKnown RBP20.08■□□□□ 0.8
SPAST-203ENST00000615843 OATP04181 439 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 ERFP50548 548 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 LONRF1Q17RB8 773 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 XXYLT1Q8NBI6 393 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 ENGASEQ8NFI3 743 aa20.08■□□□□ 0.8
SPAST-203ENST00000615843 BRD2P25440 801 aaKnown RBP20.07■□□□□ 0.8
SPAST-203ENST00000615843 COPS2P61201 443 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 TFDP2Q14188 446 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 NAALADL2Q58DX5 795 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 NOD1Q9Y239 953 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 SNX5Q9Y5X3 404 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 METP08581 1390 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 MROH7-TTC4A0A0A0MT08 1334 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 CDH16O75309 829 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 SOX5P35711 763 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 SYDE2Q5VT97 1194 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 LBHD1Q9BQE6 289 aaPredicted RBP20.07■□□□□ 0.8
SPAST-203ENST00000615843 TCP10L2B9ZVM9 353 aa20.07■□□□□ 0.8
SPAST-203ENST00000615843 ALDH1B1P30837 517 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms