RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 VSIG1Q86XK7 387 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 CCDC117Q8IWD4 279 aaPredicted RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 CCDC13Q8IYE1 715 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 KCTD6Q8NC69 237 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 SMC1BQ8NDV3 1235 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 NKX2-3Q8TAU0 364 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 ARHGEF2Q92974 986 aaKnown RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 TEX13BQ9BXU2 312 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 SLC38A10Q9HBR0 1119 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 SLC9A2Q9UBY0 812 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 CPA4Q9UI42 421 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 CCL15-CCL14A0A0B4J2E2 113 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 C2CD2LO14523 706 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 P4HBP07237 508 aaKnown RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 STX2P32856 288 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 ATN1P54259 1190 aaPredicted RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 PMS1P54277 932 aaKnown RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 CCL15Q16663 113 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 ZNF699Q32M78 642 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 E4F1Q66K89 784 aaPredicted RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 RAD9BQ6WBX8 426 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 MICALCLQ6ZW33 695 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 ANKS4BQ8N8V4 417 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 EXT2Q93063 718 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 ATP6V0A4Q9HBG4 840 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 HERC5Q9UII4 1024 aaKnown RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 PIN4Q9Y237 131 aaKnown RBP4.09□□□□□ -1.75
LTN1-207ENST00000614971 PCDHA10Q9Y5I2 948 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 FHOD1Q9Y613 1164 aa4.09□□□□□ -1.75
LTN1-207ENST00000614971 ASTN2O75129 1339 aaPredicted RBP4.09□□□□□ -1.76
LTN1-207ENST00000614971 SPATA31A6Q5VVP1 1343 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 SALL3Q9BXA9 1300 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 A0A087X0B3 334 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 TCRBV5S4A2TA0A5A2 114 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 A6NJR5 290 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 ATF2P15336 505 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 FERP16591 822 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 TCP1P17987 556 aaKnown RBP4.09□□□□□ -1.76
LTN1-207ENST00000614971 CNTN2Q02246 1040 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 KCNA1Q09470 495 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 NXNQ6DKJ4 435 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 GOLGA5Q8TBA6 731 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 CCDC51Q96ER9 411 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 MTRQ99707 1265 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 CUEDC2Q9H467 287 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 ALG13Q9NP73 1137 aaKnown RBP4.09□□□□□ -1.76
LTN1-207ENST00000614971 DAAM1Q9Y4D1 1078 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 TCHHQ07283 1943 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 CNTNAP4Q9C0A0 1308 aa4.09□□□□□ -1.76
LTN1-207ENST00000614971 GAP43P17677 238 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 KCNJ1P48048 391 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 HDLBPQ00341 1268 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 SEPT6Q14141 434 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 TFDP1Q14186 410 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 INTS8Q75QN2 995 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 AGR3Q8TD06 166 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 KIF9Q9HAQ2 790 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 TOPORSQ9NS56 1045 aaPredicted RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 AMACRQ9UHK6 382 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 GGT7Q9UJ14 662 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 LRFN2Q9ULH4 789 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 STK36Q9NRP7 1315 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 MSH4O15457 936 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CRCPO75575 148 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 HMBSP08397 361 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 PSMA2P25787 234 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 PRKCEQ02156 737 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 LRRC63Q05C16 580 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 AP3B2Q13367 1082 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 TMED2Q15363 201 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 PKN1Q16512 942 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ZNF667Q5HYK9 610 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 TTC30AQ86WT1 665 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ERICH1Q86X53 443 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 DDX42Q86XP3 938 aaKnown RBP eCLIP4.08□□□□□ -1.76
LTN1-207ENST00000614971 CCDC125Q86Z20 511 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 GIMAP7Q8NHV1 300 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 KIF12Q96FN5 646 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CFAP36Q96G28 342 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SPATA17Q96L03 361 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 THAP9Q9H5L6 903 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ACP6Q9NPH0 428 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SNX9Q9Y5X1 595 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ADGRG1Q9Y653 693 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 BCL9O00512 1426 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SPDYE2BA6NHP3 402 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 EIF4E1BA6NMX2 242 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 SCAMP3O14828 347 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 SH3BP5O60239 455 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 VTNP04004 478 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SPDYE6P0CI01 402 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 LCP1P13796 627 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 NTRK3Q16288 839 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 HADHQ16836 314 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 KIZQ2M2Z5 673 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 DARS2Q6PI48 645 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 FAM151AQ8WW52 585 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 LRRC45Q96CN5 670 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 TBC1D31Q96DN5 1066 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms