RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 LARP6Q9BRS8 491 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-218ENST00000614502 MRPL9Q9BYD2 267 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-218ENST00000614502 TLE6Q9H808 572 aa13.63□□□□□ -0.23
PDLIM2-218ENST00000614502 IGKV6-21A0A0C4DH24 114 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 GAS2O43903 313 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 MAFO75444 373 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 EYA4O95677 639 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 P4HBP07237 508 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 FGFR1P11362 822 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 QARSP47897 775 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 NRIP1P48552 1158 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 COASYQ13057 564 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 NPY5RQ15761 445 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 SLFN12Q8IYM2 578 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 MRPS27Q92552 414 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 MSLNLQ96KJ4 702 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 FBXL18Q96ME1 805 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 ZNF558Q96NG5 402 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 AIFM3Q96NN9 605 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 CASD1Q96PB1 797 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 CWH43Q9H720 699 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 NGRNQ9NPE2 291 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 CLEC1BQ9P126 229 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 HCSTQ9UBK5 93 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
PDLIM2-218ENST00000614502 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 GLP2RO95838 553 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 RAB27AP51159 221 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 NHLH1Q02575 133 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 KCNT2Q6UVM3 1135 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 OTUD6AQ7L8S5 288 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 RBM23Q86U06 439 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 RNF135Q8IUD6 432 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 GJA10Q969M2 543 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 KCNMB3Q9NPA1 279 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 SPG21Q9NZD8 308 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 SUCLA2Q9P2R7 463 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 ORC3Q9UBD5 711 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 TPCN1Q9ULQ1 816 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 ARID2Q68CP9 1835 aa13.61□□□□□ -0.23
PDLIM2-218ENST00000614502 SLC37A4O43826 429 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 STBD1O95210 358 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 KRT2P35908 639 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 RFC5P40937 340 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 RBM10P98175 930 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 EPHA7Q15375 998 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 HERC4Q5GLZ8 1057 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 RHPN2Q8IUC4 686 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 C4orf19Q8IY42 314 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 RNF169Q8NCN4 708 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 SMRP1Q8NCR6 262 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 TCP11Q8WWU5 503 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 CEP89Q96ST8 783 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 CYP26B1Q9NR63 512 aa13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 BARX2Q9UMQ3 279 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-218ENST00000614502 KMT2EQ8IZD2 1858 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 A0A087WZ62 844 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 FSCN2O14926 492 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 ASAP2O43150 1006 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 ALDH7A1P49419 539 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 MRE11P49959 708 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 POLGP54098 1239 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 TRIM29Q14134 588 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 DUSP6Q16828 381 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 TWF2Q6IBS0 349 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 ANO5Q75V66 913 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 CATSPER4Q7RTX7 472 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 SRGAP1Q7Z6B7 1085 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 ZNF598Q86UK7 904 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 PGBD4Q96DM1 585 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 ZNF668Q96K58 619 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 CEP170P1Q96L14 293 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 FDXACB1Q9BRP7 624 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 ENTPD7Q9NQZ7 604 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 VAV3Q9UKW4 847 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 MYO10Q9HD67 2058 aa13.59□□□□□ -0.23
PDLIM2-218ENST00000614502 EML1O00423 815 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 PER2O15055 1255 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 ZNF623O75123 536 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 ATF7P17544 494 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 PHKA2P46019 1235 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 AK2P54819 239 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 DRP2Q13474 957 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 GIT2Q14161 759 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 PCBP1Q15365 356 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 TMEM184AQ6ZMB5 413 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 TMC7Q7Z402 723 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 VN1R2Q8NFZ6 395 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 PSPC1Q8WXF1 523 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 NLRP4Q96MN2 994 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 TCF25Q9BQ70 676 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 DHX33Q9H6R0 707 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 ZSWIM4Q9H7M6 989 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 PIN4Q9Y237 131 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms