RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ERCC4Q92889 916 aaPredicted RBP16.24■□□□□ 0.19
CD48-203ENST00000613788 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 NTPCRQ9BSD7 190 aaKnown RBP16.24■□□□□ 0.19
CD48-203ENST00000613788 OLFML3Q9NRN5 406 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 ATP11BQ9Y2G3 1177 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 CCDC169A6NNP5 214 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 RHOBTB3O94955 611 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 VTNP04004 478 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 SRGAP2CP0DJJ0 459 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 MAPTP10636 758 aaKnown RBP16.24■□□□□ 0.19
CD48-203ENST00000613788 NLRP11P59045 1033 aaKnown RBP16.24■□□□□ 0.19
CD48-203ENST00000613788 BFSP2Q13515 415 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 LRRC26Q2I0M4 334 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 RBM43Q6ZSC3 357 aaKnown RBP16.24■□□□□ 0.19
CD48-203ENST00000613788 ZNF410Q86VK4 478 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 SFR1Q86XK3 245 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 FAM178BQ8IXR5 827 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 CAGE1Q8TC20 777 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 MRPL44Q9H9J2 332 aaKnown RBP16.24■□□□□ 0.19
CD48-203ENST00000613788 KMT5AQ9NQR1 393 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 H0YCG3 227 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 SCP2P22307 547 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 ABCD1P33897 745 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 THPOP40225 353 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 NPTX2P47972 431 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 EHHADHQ08426 723 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 FAM26FQ5R3K3 315 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 KSR1Q8IVT5 923 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 TRIML1Q8N9V2 468 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 RNF149Q8NC42 400 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 DEPTORQ8TB45 409 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 NLRP7Q8WX94 980 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 BSNDQ8WZ55 320 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 NLRP4Q96MN2 994 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 SCLT1Q96NL6 688 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 C2orf40Q9H1Z8 148 aa16.23■□□□□ 0.19
CD48-203ENST00000613788 GPC3P51654 580 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 MRPS6P82932 125 aaKnown RBP16.22■□□□□ 0.19
CD48-203ENST00000613788 TMEM62Q0P6H9 643 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 FAAP100Q0VG06 881 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 CAPSQ13938 189 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 STXBP4Q6ZWJ1 553 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 ZNF720Q7Z2F6 126 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 DHX38Q92620 1227 aaKnown RBP16.22■□□□□ 0.19
CD48-203ENST00000613788 NFKBIZQ9BYH8 718 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 INO80BQ9C086 356 aaPredicted RBP16.22■□□□□ 0.19
CD48-203ENST00000613788 TBC1D7Q9P0N9 293 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 MAN1B1Q9UKM7 699 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 DNAH12Q6ZR08 3092 aa16.22■□□□□ 0.19
CD48-203ENST00000613788 A0A087WZ62 844 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 SLC16A4O15374 487 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 GPR32O75388 356 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 PHKA2P46019 1235 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 EFNA5P52803 228 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
CD48-203ENST00000613788 NCKAP1LP55160 1127 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 RBL2Q08999 1139 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 ALCAMQ13740 583 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 KIZQ2M2Z5 673 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 TRIM71Q2Q1W2 868 aaKnown RBP16.21■□□□□ 0.19
CD48-203ENST00000613788 ZNF658Q5TYW1 1059 aaPredicted RBP16.21■□□□□ 0.19
CD48-203ENST00000613788 SASS6Q6UVJ0 657 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 HAUS6Q7Z4H7 955 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 ZBTB8OSQ8IWT0 167 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 WNT8BQ93098 351 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 FDXACB1Q9BRP7 624 aaPredicted RBP16.21■□□□□ 0.19
CD48-203ENST00000613788 CELF4Q9BZC1 486 aaKnown RBP16.21■□□□□ 0.19
CD48-203ENST00000613788 GCOM2Q9BZD3 368 aaPredicted RBP16.21■□□□□ 0.19
CD48-203ENST00000613788 ADAMTS10Q9H324 1103 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 ST6GALNAC4Q9H4F1 302 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 PCDHB13Q9Y5F0 798 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 TRPV2Q9Y5S1 764 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 PHLPP2Q6ZVD8 1323 aa16.21■□□□□ 0.19
CD48-203ENST00000613788 K7ENM7 598 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 BIN1O00499 593 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 KIF20AO95235 890 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 GCNT3O95395 438 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 CLTBP09497 229 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 CKBP12277 381 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
CD48-203ENST00000613788 PTENP60484 403 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 MORC3Q14149 939 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 FAM26DQ5JW98 314 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 IFNLR1Q8IU57 520 aaPredicted RBP16.2■□□□□ 0.18
CD48-203ENST00000613788 HPS3Q969F9 1004 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 FIZ1Q96SL8 496 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 PPP1R16BQ96T49 567 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 HTATIP2Q9BUP3 242 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 TMEM39AQ9NV64 488 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 ARHGAP28Q9P2N2 729 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 CDY2AQ9Y6F7 541 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 EVPLQ92817 2033 aa16.2■□□□□ 0.18
CD48-203ENST00000613788 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
CD48-203ENST00000613788 K7ERI5 159 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 STK4Q13043 487 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms