RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 WDR5P61964 334 aaKnown RBP18.43■□□□□ 0.54
IRF1-211ENST00000613424 MCM6Q14566 821 aa18.43■□□□□ 0.54
IRF1-211ENST00000613424 ODR4Q5SWX8 454 aa18.43■□□□□ 0.54
IRF1-211ENST00000613424 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
IRF1-211ENST00000613424 RTN4RL1Q86UN2 441 aaPredicted RBP18.43■□□□□ 0.54
IRF1-211ENST00000613424 RNF149Q8NC42 400 aa18.43■□□□□ 0.54
IRF1-211ENST00000613424 SCAND2PQ9GZW5 306 aaPredicted RBP18.43■□□□□ 0.54
IRF1-211ENST00000613424 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
IRF1-211ENST00000613424 TRIOBPQ9H2D6 2365 aa18.43■□□□□ 0.54
IRF1-211ENST00000613424 A0A087X0B3 334 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.42■□□□□ 0.54
IRF1-211ENST00000613424 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.42■□□□□ 0.54
IRF1-211ENST00000613424 ENPP3O14638 875 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 FGFR4P22455 802 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 KCNJ6P48051 423 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 POU5F1BQ06416 359 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 CAPSQ13938 189 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 TFDP1Q14186 410 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 DHX8Q14562 1220 aaKnown RBP18.42■□□□□ 0.54
IRF1-211ENST00000613424 FAM109BQ6ICB4 259 aaPredicted RBP18.42■□□□□ 0.54
IRF1-211ENST00000613424 FTHL17Q9BXU8 183 aa18.42■□□□□ 0.54
IRF1-211ENST00000613424 INO80BQ9C086 356 aaPredicted RBP18.42■□□□□ 0.54
IRF1-211ENST00000613424 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.41■□□□□ 0.54
IRF1-211ENST00000613424 GRXCR1A8MXD5 290 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 ATP2A2P16615 1042 aaKnown RBP18.41■□□□□ 0.54
IRF1-211ENST00000613424 GUCY2CP25092 1073 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 PTENP60484 403 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 DEFB103AP81534 67 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 NAALADL2Q58DX5 795 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 ARSHQ5FYA8 562 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 CCDC73Q6ZRK6 1079 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 SRGAP1Q7Z6B7 1085 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 DAW1Q8N136 415 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 PHOSPHO2Q8TCD6 241 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 BSNDQ8WZ55 320 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 LARP4BQ92615 738 aaKnown RBP18.41■□□□□ 0.54
IRF1-211ENST00000613424 KIFAP3Q92845 792 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 MINDY3Q9H8M7 445 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 STK17AQ9UEE5 414 aa18.41■□□□□ 0.54
IRF1-211ENST00000613424 NPHP3-ACAD11A0A0J9YXS1 232 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 HIP1RO75146 1068 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 PHKA2P46019 1235 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 RAD51AP2Q09MP3 1159 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 RESP18Q5W5W9 173 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 ADALQ6DHV7 355 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 GPBP1Q86WP2 473 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 PDILTQ8N807 584 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 LINC01599Q8WXQ3 324 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 SLC9A7Q96T83 725 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 TIPINQ9BVW5 301 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 GDPD2Q9HCC8 539 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 KCND2Q9NZV8 630 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 CHMP5Q9NZZ3 219 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 MICAL3Q7RTP6 2002 aa18.4■□□□□ 0.54
IRF1-211ENST00000613424 LRRIQ4A6NIV6 560 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 SFI1A8K8P3 1242 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 SOX1O00570 391 aaPredicted RBP18.39■□□□□ 0.53
IRF1-211ENST00000613424 MGEA5O60502 916 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 AMHP03971 560 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 SFPQP23246 707 aaKnown RBP eCLIP18.39■□□□□ 0.53
IRF1-211ENST00000613424 STAT6P42226 847 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 MAPK7Q13164 816 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 FAM43BQ6ZT52 329 aaPredicted RBP18.39■□□□□ 0.53
IRF1-211ENST00000613424 CATSPER4Q7RTX7 472 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 TMCO2Q7Z6W1 182 aaPredicted RBP18.39■□□□□ 0.53
IRF1-211ENST00000613424 IFNLR1Q8IU57 520 aaPredicted RBP18.39■□□□□ 0.53
IRF1-211ENST00000613424 IFT74Q96LB3 600 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 IPO9Q96P70 1041 aaKnown RBP18.39■□□□□ 0.53
IRF1-211ENST00000613424 ADAM2Q99965 735 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 NFKBIZQ9BYH8 718 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
IRF1-211ENST00000613424 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
IRF1-211ENST00000613424 NAMPTP43490 491 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 SMAD3P84022 425 aaKnown RBP18.38■□□□□ 0.53
IRF1-211ENST00000613424 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
IRF1-211ENST00000613424 DSC3Q14574 896 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 PPP2R5AQ15172 486 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 SV2BQ7L1I2 683 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 HERC6Q8IVU3 1022 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 MYOCDQ8IZQ8 938 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 TOP1MTQ969P6 601 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 DRC1Q96MC2 740 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 RGS18Q9NS28 235 aa18.38■□□□□ 0.53
IRF1-211ENST00000613424 DENND3A2RUS2 1198 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 INO80B-WBP1J3KQ70 363 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 POLR2DO15514 142 aaKnown RBP18.37■□□□□ 0.53
IRF1-211ENST00000613424 ZSCAN20P17040 1043 aaPredicted RBP18.37■□□□□ 0.53
IRF1-211ENST00000613424 CMA1P23946 247 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 RABGGTBP53611 331 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 PEX3P56589 373 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 MBTD1Q05BQ5 628 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 GIT2Q14161 759 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 E2F4Q16254 413 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 LRCH3Q96II8 777 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 CHST12Q9NRB3 414 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
IRF1-211ENST00000613424 UPP2O95045 317 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 KRT18P05783 430 aaKnown RBP18.36■□□□□ 0.53
IRF1-211ENST00000613424 PBX2P40425 430 aa18.36■□□□□ 0.53
IRF1-211ENST00000613424 CDCA2Q69YH5 1023 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms