RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 L3MBTL1Q9Y468 752 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 TNFAIP8O95379 198 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 PPP4R4Q6NUP7 873 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 MRPL1Q9BYD6 325 aaKnown RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 FAM207AQ9NSI2 230 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 ADCY6O43306 1168 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 CHN1P15882 459 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 PDIA5Q14554 519 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 AZI2Q9H6S1 392 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 FBXO28Q9NVF7 368 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 BAG5Q9UL15 447 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 CAPN11Q9UMQ6 739 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 RIMS1Q86UR5 1692 aaKnown RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 MGRN1O60291 552 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 IDH1O75874 414 aaKnown RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 PM20D2Q8IYS1 436 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 BEST2Q8NFU1 509 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 SEPT1Q8WYJ6 367 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 HNRNPCL2B2RXH8 293 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 CALUO43852 315 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 SRGAP2O75044 1071 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 KLHL2O95198 593 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 EPN2O95208 641 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 SKIV2L2P42285 1042 aaKnown RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 SLCO1A2P46721 670 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 CASP5P51878 434 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 RPS6KA2Q15349 733 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 SLC26A7Q8TE54 656 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 NAT14Q8WUY8 206 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 TRPV6Q9H1D0 765 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 ATP7AQ04656 1500 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 ZC3H12AQ5D1E8 599 aaKnown RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 DTHD1Q6ZMT9 781 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 TRAPPC11Q7Z392 1133 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 FNBP1Q96RU3 617 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 PCDHA5Q9Y5H7 936 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 FAM47DPA6NHR8 397 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 GOLGA8JA6NMD2 632 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 RASSF9O75901 435 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 FAM58BPP0C7Q3 252 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 EIF1ADQ8N9N8 165 aaKnown RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-213ENST00000613099 ERP27Q96DN0 273 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 ZBTB21Q9ULJ3 1066 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 SNX12Q9UMY4 172 aa5.27□□□□□ -1.57
VPS13D-213ENST00000613099 ABCC3O15438 1527 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MED14O60244 1454 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 A0A1W2PRG6 482 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MAGEB16A2A368 324 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 CRCPO75575 148 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PARP10Q53GL7 1025 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 LACTB2Q53H82 288 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MICU3Q86XE3 530 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ABCF3Q9NUQ8 709 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 AIPL1Q9NZN9 384 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 LEMD3Q9Y2U8 911 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 LRRC36Q1X8D7 754 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 DPH5Q9H2P9 285 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 AS3MTQ9HBK9 375 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TMBIM4Q9HC24 238 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MYH9P35579 1960 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 GTPBP6O43824 516 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PGM3O95394 542 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 H2AFZP0C0S5 128 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SDE2Q6IQ49 451 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 CAPN12Q6ZSI9 719 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 H2AFVQ71UI9 128 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SCFD1Q8WVM8 642 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PTPRN2Q92932 1015 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 KCNK16Q96T55 309 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ITPKCQ96DU7 683 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ZFYVE19Q96K21 471 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 IARS2Q9NSE4 1012 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 RNF103-CHMP3A0A140T963 221 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 GNAT3A8MTJ3 354 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ATP1A3P13637 1013 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ARFIP2P53365 341 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TRIP10Q15642 601 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MCM10Q7L590 875 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 APPBP2Q92624 585 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 INPP5DQ92835 1189 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 OSBPL3Q9H4L5 887 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SPEF2Q9C093 1822 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ITGADQ13349 1161 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 CYTH1Q15438 398 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ACCSLQ4AC99 568 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TCHHL1Q5QJ38 904 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PPP1R15BQ5SWA1 713 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 FAM173BQ6P4H8 233 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PACS1Q6VY07 963 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MFSD6Q6ZSS7 791 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SCUBE1Q8IWY4 988 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TRMT44Q8IYL2 757 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 OSCP1Q8WVF1 389 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 FAM161BQ96MY7 647 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 C12orf4Q9NQ89 552 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 RPRD1BQ9NQG5 326 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 NUP153P49790 1475 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PIK3CDO00329 1044 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms