RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 DDX39AO00148 427 aaKnown RBP12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 LGR5O75473 907 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 FAM228BP0C875 321 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 CNNM4Q6P4Q7 775 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 RANBP17Q9H2T7 1088 aaKnown RBP12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 PCDHA12Q9UN75 941 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 PLAAQ9Y263 795 aa12.78□□□□□ -0.36
PPP4R3B-204ENST00000612688 SORBS3O60504 671 aa12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 KIAA0753Q2KHM9 967 aa12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 GJB7Q6PEY0 223 aa12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 LPAR1Q92633 364 aa12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 RSRC1Q96IZ7 334 aaKnown RBP12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 NUP58Q9BVL2 599 aa12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 LRRC4CQ9HCJ2 640 aa12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 SNCAIPQ9Y6H5 919 aa12.77□□□□□ -0.36
PPP4R3B-204ENST00000612688 SSC5DA1L4H1 1573 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 KCNK3O14649 394 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 CYP4A11Q02928 519 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 TMEM266Q2M3C6 531 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 TREML2Q5T2D2 321 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 MMGT1Q8N4V1 131 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 MDM1Q8TC05 714 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 BAP1Q92560 729 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 HAS1Q92839 578 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 ZCWPW1Q9H0M4 648 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 RRAGCQ9HB90 399 aa12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 MRPL11Q9Y3B7 192 aaKnown RBP12.77□□□□□ -0.37
PPP4R3B-204ENST00000612688 ZNF536O15090 1300 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 ABCB11O95342 1321 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 MYCLP12524 364 aaPredicted RBP12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 THEMIS2Q5TEJ8 643 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 TCERG1LQ5VWI1 586 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 KSR1Q8IVT5 923 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 FAM114A1Q8IWE2 563 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 CASKIN2Q8WXE0 1202 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 PAGR1Q9BTK6 254 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 ZNF112Q9UJU3 913 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 PPP1R9AQ9ULJ8 1098 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 ZBED4O75132 1171 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 EPB41P11171 864 aaKnown RBP12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 ALS2CLQ60I27 953 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 KCNV2Q8TDN2 545 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 NOX5Q96PH1 765 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 ERGIC2Q96RQ1 377 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 C7orf25Q9BPX7 421 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 COL20A1Q9P218 1284 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 KIAA1024Q9UPX6 916 aa12.76□□□□□ -0.37
PPP4R3B-204ENST00000612688 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 SFI1A8K8P3 1242 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 KRT18P05783 430 aaKnown RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 SCTRP47872 440 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 HERC4Q5GLZ8 1057 aaPredicted RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 DCAF17Q5H9S7 520 aaPredicted RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 WDR78Q5VTH9 848 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 TRIM68Q6AZZ1 485 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 UHMK1Q8TAS1 419 aaKnown RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 UBLCP1Q8WVY7 318 aaPredicted RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 IRAK4Q9NWZ3 460 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 CHORDC1Q9UHD1 332 aaPredicted RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 POTECB2RU33 542 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 VWA5AO00534 786 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 RAD51CO43502 376 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 CEP104O60308 925 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 FAM107AO95990 144 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 ICAM1P05362 532 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 SLC9A1P19634 815 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 CRYMQ14894 314 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 MAN2A1Q16706 1144 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 CENPPQ6IPU0 288 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 IL31RAQ8NI17 732 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 HVCN1Q96D96 273 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 CALRP27797 417 aaKnown RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 FLT3P36888 993 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 AMPD3Q01432 767 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 HGSNATQ68CP4 663 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 EMBQ6PCB8 327 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 LMBR1Q8WVP7 490 aa12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 DDX47Q9H0S4 455 aaKnown RBP12.75□□□□□ -0.37
PPP4R3B-204ENST00000612688 SLC38A10Q9HBR0 1119 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms