RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 MTUS1Q9ULD2 1270 aa20.1■□□□□ 0.81
SEMA3B-211ENST00000612509 LRFN2Q9ULH4 789 aa20.1■□□□□ 0.81
SEMA3B-211ENST00000612509 KIAA1024Q9UPX6 916 aa20.1■□□□□ 0.81
SEMA3B-211ENST00000612509 KIAA1671Q9BY89 1806 aa20.1■□□□□ 0.81
SEMA3B-211ENST00000612509 ASAP2O43150 1006 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 DGKIO75912 1065 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 SRGAP2CP0DJJ0 459 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 ZSCAN20P17040 1043 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 ARL2P36404 184 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 ERVK-21P61565 698 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 ADGRE1Q14246 886 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 MXD4Q14582 209 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 FAM173BQ6P4H8 233 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 PADI6Q6TGC4 694 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 MCPH1Q8NEM0 835 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 ZNF689Q96CS4 500 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 GPRC5CQ9NQ84 441 aa20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 FNDC1Q4ZHG4 1894 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-211ENST00000612509 GLRA2P23416 452 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 PHKA2P46019 1235 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 CAPSQ13938 189 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 TFDP1Q14186 410 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 CATSPER4Q7RTX7 472 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 SRGAP1Q7Z6B7 1085 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 C17orf80Q9BSJ5 609 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 BHMT2Q9H2M3 363 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 ZSCAN16Q9H4T2 348 aaPredicted RBP20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 MINDY3Q9H8M7 445 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 PIN4Q9Y237 131 aaKnown RBP20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 PCDHB7Q9Y5E2 793 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 CLIC4Q9Y696 253 aa20.08■□□□□ 0.81
SEMA3B-211ENST00000612509 RFXAPO00287 272 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 GATMP50440 423 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 BTG3Q14201 252 aaPredicted RBP20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 PTPAQ15257 358 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 HYIQ5T013 277 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 MAEAQ7L5Y9 396 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 CMTR2Q8IYT2 770 aaKnown RBP20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 FIBCD1Q8N539 461 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 MAFAQ8NHW3 353 aaPredicted RBP20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 GDPD5Q8WTR4 605 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 AK8Q96MA6 479 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 ELAC1Q9H777 363 aaKnown RBP20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 AGPAT5Q9NUQ2 364 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 TMEM161AQ9NX61 479 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 DACT1Q9NYF0 836 aa20.07■□□□□ 0.8
SEMA3B-211ENST00000612509 E9PMD0 336 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 EYA4O95677 639 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 CYP11B2P19099 503 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 PTENP60484 403 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 FAM189BP81408 668 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 GRIN1Q05586 938 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 ZRSR1Q15695 479 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 PAN2Q504Q3 1202 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 FAM102BQ5T8I3 360 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 IFNLR1Q8IU57 520 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 SAMD11Q96NU1 681 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 PNMA5Q96PV4 448 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 CHST12Q9NRB3 414 aa20.06■□□□□ 0.8
SEMA3B-211ENST00000612509 LINC00271P0C7V0 271 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 IGFBP4P22692 258 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 GRB10Q13322 594 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 TMEM119Q4V9L6 283 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 TWF2Q6IBS0 349 aaKnown RBP20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 KCNK18Q7Z418 384 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 CABP7Q86V35 215 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 ECHDC2Q86YB7 292 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 SPRYD3Q8NCJ5 442 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 FBXO22Q8NEZ5 403 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 NFKBIZQ9BYH8 718 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 NT5C3AQ9H0P0 336 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 DNM3Q9UQ16 869 aa20.05■□□□□ 0.8
SEMA3B-211ENST00000612509 LPXNO60711 386 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 ERLIN2O94905 339 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 LONP1P36776 959 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 MBTD1Q05BQ5 628 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 POU5F1BQ06416 359 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 EPC2Q52LR7 807 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 TMEM192Q8IY95 271 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 BSNDQ8WZ55 320 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 CDK5RAP3Q96JB5 506 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 USP28Q96RU2 1077 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 RWDD3Q9Y3V2 267 aa20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 MRPL42Q9Y6G3 142 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-211ENST00000612509 COL6A3P12111 3177 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 A0A0U1RQF3 1178 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 LRRIQ4A6NIV6 560 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 TBKBP1A7MCY6 615 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 INO80B-WBP1J3KQ70 363 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 SLC26A4O43511 780 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 TSPAN1O60635 241 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 FGFR1P11362 822 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 PDIA4P13667 645 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 ATF7P17544 494 aaPredicted RBP20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 CTNNB1P35222 781 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 CEBPZQ03701 1054 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 PCBP1Q15365 356 aaKnown RBP eCLIP20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 CDCA2Q69YH5 1023 aaPredicted RBP20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 ZNF598Q86UK7 904 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms