RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 GCOM2Q9BZD3 368 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-207ENST00000611426 CWH43Q9H720 699 aa24.36■■□□□ 1.49
CBWD3-207ENST00000611426 ORC3Q9UBD5 711 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-207ENST00000611426 ZDHHC9Q9Y397 364 aa24.36■■□□□ 1.49
CBWD3-207ENST00000611426 IGKV6-21A0A0C4DH24 114 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 EML1O00423 815 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 CCNT1O60563 726 aaKnown RBP24.35■■□□□ 1.49
CBWD3-207ENST00000611426 CTDNEP1O95476 244 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 GCFC2P16383 781 aaKnown RBP24.35■■□□□ 1.49
CBWD3-207ENST00000611426 LAG3P18627 525 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 PIK3AP1Q6ZUJ8 805 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 ECHDC2Q86YB7 292 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 EFHBQ8N7U6 833 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 OXER1Q8TDS5 423 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 CASD1Q96PB1 797 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 KCNMB3Q9NPA1 279 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 CD207Q9UJ71 328 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 C5orf42Q9H799 3197 aa24.35■■□□□ 1.49
CBWD3-207ENST00000611426 MBTPS2O43462 519 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 MARCH6O60337 910 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 CSDE1O75534 798 aaKnown RBP24.34■■□□□ 1.49
CBWD3-207ENST00000611426 PDCP20941 246 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 QARSP47897 775 aaKnown RBP24.34■■□□□ 1.49
CBWD3-207ENST00000611426 ZP2Q05996 745 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 PPP2R5CQ13362 524 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 SMAD2Q15796 467 aaKnown RBP24.34■■□□□ 1.49
CBWD3-207ENST00000611426 ANO5Q75V66 913 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 NAP1L4Q99733 375 aaKnown RBP24.34■■□□□ 1.49
CBWD3-207ENST00000611426 TLE6Q9H808 572 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 TLR9Q9NR96 1032 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 DACT1Q9NYF0 836 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 SUCLA2Q9P2R7 463 aaPredicted RBP24.34■■□□□ 1.49
CBWD3-207ENST00000611426 VAV3Q9UKW4 847 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 PCDHGC5Q9Y5F6 944 aa24.34■■□□□ 1.49
CBWD3-207ENST00000611426 A0A087WZ62 844 aa24.33■■□□□ 1.49
CBWD3-207ENST00000611426 DKC1O60832 514 aaKnown RBP eCLIP24.33■■□□□ 1.49
CBWD3-207ENST00000611426 GPR37L1O60883 481 aa24.33■■□□□ 1.49
CBWD3-207ENST00000611426 MAFO75444 373 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-207ENST00000611426 GJB2P29033 226 aa24.33■■□□□ 1.49
CBWD3-207ENST00000611426 HMGN5P82970 282 aaKnown RBP24.33■■□□□ 1.49
CBWD3-207ENST00000611426 SMAD4Q13485 552 aaKnown RBP24.33■■□□□ 1.49
CBWD3-207ENST00000611426 LRRC55Q6ZSA7 311 aa24.33■■□□□ 1.49
CBWD3-207ENST00000611426 RHPN2Q8IUC4 686 aa24.33■■□□□ 1.49
CBWD3-207ENST00000611426 ADHFE1Q8IWW8 467 aa24.33■■□□□ 1.49
CBWD3-207ENST00000611426 JPH2Q9BR39 696 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-207ENST00000611426 FDXACB1Q9BRP7 624 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-207ENST00000611426 RNF19AQ9NV58 838 aa24.33■■□□□ 1.49
CBWD3-207ENST00000611426 A0A0U1RQF3 1178 aa24.32■■□□□ 1.48
CBWD3-207ENST00000611426 EOMESO95936 686 aa24.32■■□□□ 1.48
CBWD3-207ENST00000611426 ALADP13716 330 aa24.32■■□□□ 1.48
CBWD3-207ENST00000611426 ERVFC1P60507 584 aa24.32■■□□□ 1.48
CBWD3-207ENST00000611426 PKP1Q13835 747 aa24.32■■□□□ 1.48
CBWD3-207ENST00000611426 PLA2G4FQ68DD2 849 aa24.32■■□□□ 1.48
CBWD3-207ENST00000611426 CHST12Q9NRB3 414 aa24.32■■□□□ 1.48
CBWD3-207ENST00000611426 FAM86C2PA6NEL3 165 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 TBX3O15119 743 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 P4HBP07237 508 aaKnown RBP24.31■■□□□ 1.48
CBWD3-207ENST00000611426 PDE12Q6L8Q7 609 aaKnown RBP24.31■■□□□ 1.48
CBWD3-207ENST00000611426 ZNF410Q86VK4 478 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 LRRC43Q8N309 656 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 NSUN7Q8NE18 718 aaKnown RBP24.31■■□□□ 1.48
CBWD3-207ENST00000611426 HAS1Q92839 578 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 MSLNLQ96KJ4 702 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 GBP4Q96PP9 640 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 INO80BQ9C086 356 aaPredicted RBP24.31■■□□□ 1.48
CBWD3-207ENST00000611426 C11orf16Q9NQ32 467 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 CYP26B1Q9NR63 512 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 CLEC1BQ9P126 229 aa24.31■■□□□ 1.48
CBWD3-207ENST00000611426 PUF60Q9UHX1 559 aaKnown RBP24.31■■□□□ 1.48
CBWD3-207ENST00000611426 C19orf67A6NJJ6 358 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 PER2O15055 1255 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 FDPSP14324 419 aaKnown RBP24.3■■□□□ 1.48
CBWD3-207ENST00000611426 SYT1P21579 422 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 SFPQP23246 707 aaKnown RBP eCLIP24.3■■□□□ 1.48
CBWD3-207ENST00000611426 KRT2P35908 639 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 PLCB3Q01970 1234 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 EARS2Q5JPH6 523 aaKnown RBP24.3■■□□□ 1.48
CBWD3-207ENST00000611426 KCNT2Q6UVM3 1135 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 KSR1Q8IVT5 923 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 MRPS27Q92552 414 aaKnown RBP24.3■■□□□ 1.48
CBWD3-207ENST00000611426 ZNF558Q96NG5 402 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 POP1Q99575 1024 aaKnown RBP24.3■■□□□ 1.48
CBWD3-207ENST00000611426 BRMS1Q9HCU9 246 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 LZTS1Q9Y250 596 aa24.3■■□□□ 1.48
CBWD3-207ENST00000611426 STX6O43752 255 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 BAG4O95429 457 aaKnown RBP24.29■■□□□ 1.48
CBWD3-207ENST00000611426 NPEPPSP55786 919 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 EPHA7Q15375 998 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 CLLU1OSQ5K130 101 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 ZNF598Q86UK7 904 aaKnown RBP24.29■■□□□ 1.48
CBWD3-207ENST00000611426 POTEDQ86YR6 584 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 HELQQ8TDG4 1101 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 SLC7A3Q8WY07 619 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 CEP170P1Q96L14 293 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 NLRP4Q96MN2 994 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 EYA4O95677 639 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 MCM4P33991 863 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 PPM1AP35813 382 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 KRT17Q04695 432 aa24.29■■□□□ 1.48
CBWD3-207ENST00000611426 COASYQ13057 564 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms