RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 PHKA2P46019 1235 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 ZNF174Q15697 407 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 HAUS3Q68CZ6 603 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 SRGAP1Q7Z6B7 1085 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 PRPF31Q8WWY3 499 aaKnown RBP16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 TMEM143Q96AN5 459 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 TUFT1Q9NNX1 390 aa16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 PIN4Q9Y237 131 aaKnown RBP16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
PKNOX1-210ENST00000607049 UNC80Q8N2C7 3258 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 CARNS1A5YM72 827 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 TECP42680 631 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 RAB27AP51159 221 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 LAMTOR4Q0VGL1 99 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 PCBP1Q15365 356 aaKnown RBP eCLIP16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 MCTP1Q6DN14 999 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 EP400NLQ6ZTU2 488 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 ECHDC2Q86YB7 292 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 THNSL1Q8IYQ7 743 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 LRRC43Q8N309 656 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 ADAMTS19Q8TE59 1207 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 TMX3Q96JJ7 454 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 MRPL9Q9BYD2 267 aaKnown RBP16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 WRAP73Q9P2S5 460 aaPredicted RBP16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 PUF60Q9UHX1 559 aaKnown RBP16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 PLAGL2Q9UPG8 496 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 CUL9Q8IWT3 2517 aa16.05■□□□□ 0.16
PKNOX1-210ENST00000607049 POTEMA6NI47 508 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 LAD1O00515 517 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 GRM6O15303 877 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 ERLIN2O94905 339 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 FGFR1P11362 822 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 FGFR4P22455 802 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 U2AF2P26368 475 aaKnown RBP eCLIP16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 TFF2Q03403 129 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 UBE3AQ05086 875 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 PUS10Q3MIT2 529 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 FERMT3Q86UX7 667 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 KSR1Q8IVT5 923 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 KLHL23Q8NBE8 558 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 PGBD4Q96DM1 585 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 UHRF1Q96T88 793 aaPredicted RBP16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 TMEM60Q9H2L4 133 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 UBE2ZQ9H832 354 aaPredicted RBP16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 FAM50BQ9Y247 325 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 EYSQ5T1H1 3165 aa16.04■□□□□ 0.16
PKNOX1-210ENST00000607049 CSDE1O75534 798 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 MUTP22033 750 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 PPM1AP35813 382 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 GATMP50440 423 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 KRT17Q04695 432 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 TCEAL5Q5H9L2 206 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 MCPH1Q8NEM0 835 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 TRAIPQ9BWF2 469 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 ALG13Q9NP73 1137 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 LRWD1Q9UFC0 647 aa16.03■□□□□ 0.16
PKNOX1-210ENST00000607049 PRUNE2Q8WUY3 3088 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 WNT7AO00755 349 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 LINC00271P0C7V0 271 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 KCNA5P22460 613 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 RPA1P27694 616 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 RARRES1P49788 294 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 POU5F1BQ06416 359 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 PDIA5Q14554 519 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 RILPL1Q5EBL4 403 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 PDE12Q6L8Q7 609 aaKnown RBP16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 CATSPER3Q86XQ3 398 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 PIGOQ8TEQ8 1089 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 POF1BQ8WVV4 589 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 PABPC5Q96DU9 382 aaKnown RBP16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 ZNF558Q96NG5 402 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 IFT122Q9HBG6 1241 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.16
PKNOX1-210ENST00000607049 COL4A4P53420 1690 aaPredicted RBP16.02■□□□□ 0.15
PKNOX1-210ENST00000607049 TRANK1O15050 2925 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 ARHGEF35A5YM69 484 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 TNFRSF10AO00220 468 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 ZBTB39O15060 712 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 ITGB1P05556 798 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 BMP1P13497 986 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 GJB2P29033 226 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 AXLP30530 894 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 ALDH7A1P49419 539 aaKnown RBP16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 KCNQ1P51787 676 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms